Automatic Initiation of an Ontology. - Marie-Laure Reinberger; Peter Spyns; A. Johannes Pretorius; Walter Daelemans (CoopIS/DOA/ODBASE (1), 2004)

Evaluating DOGMA-lexons Generated Automatically from a Text Corpus. - Peter Spyns; A. Johannes Pretorius; Marie-Laure Reinberger (LSTKM@EKAW, 2004)

Lexon Visualization: Visualizing Binary Fact Types in Ontology Bases. - A. Johannes Pretorius (IV, 2004)

Multidimensional Visualization of Transition Systems. - A. Johannes Pretorius; Jarke J. van Wijk (IV, 2005)

Visual analysis for ontology engineering. - A. Johannes Pretorius (J. Vis. Lang. Comput., 2005)

Verified Design of an Automated Parking Garage. - Aad Mathijssen; A. Johannes Pretorius (FMICS/PDMC, 2006)

Visual Analysis of Multivariate State Transition Graphs. - A. Johannes Pretorius; Jarke J. van Wijk (IEEE Trans. Vis. Comput. Graph., 2006)

Bridging the Semantic Gap: Visualizing Transition Graphs with User-Defined Diagrams. - A. Johannes Pretorius; Jarke J. van Wijk (IEEE Computer Graphics and Applications, 2007)

Multiple Views on System Traces. - A. Johannes Pretorius; Jarke J. van Wijk (PacificVis, 2008)

Visual Inspection of Multivariate Graphs. - A. Johannes Pretorius; Jarke J. van Wijk (Comput. Graph. Forum, 2008)

Assessing State Spaces Using Petri-Net Synthesis and Attribute-Based Visualization. - Henricus M. W. (Eric) Verbeek; A. Johannes Pretorius; Wil M. P. van der Aalst; Jarke J. van Wijk (Trans. Petri Nets Other Model. Concurr., 2008)

What does the user want to see? What do the data want to be? - A. Johannes Pretorius; Jarke J. van Wijk (Inf. Vis., 2009)

Visualization of Parameter Space for Image Analysis. - A. Johannes Pretorius; Mark-Anthony Bray; Anne E. Carpenter; Roy A. Ruddle (IEEE Trans. Vis. Comput. Graph., 2011)

Visual Parameter Optimization for Biomedical Image Analysis: A Case Study. - A. Johannes Pretorius; Derek R. Magee; Darren Treanor; Roy A. Ruddle (SIGRAD, 2012)

Cell lineage visualisation. - A. Johannes Pretorius; Imtiaz A. Khan; Rachel J. Errington (Comput. Graph. Forum, 2015)

Visual parameter optimisation for biomedical image processing. - A. Johannes Pretorius; Y. Zhou; Roy A. Ruddle (BMC Bioinform., 2015)

A Survey of Visualization for Live Cell Imaging. - A. Johannes Pretorius; Imtiaz A. Khan; Rachel J. Errington (Comput. Graph. Forum, 2017)