Protein Structure Prediction: Introductios. - A. Keith Dunker; Richard H. Lathrop (HICSS (5), 1994)

Identifying Repeated Structural Elements in Folded Proteins. - R. T. Miller; Richard J. Douthart; A. Keith Dunker (HICSS (5), 1994)

Identifying disordered regions in proteins from amino acid sequence. - Pedro Romero; Zoran Obradovic; C. Kissinger; J. E. Villafranca; A. Keith Dunker (ICNN, 1997)

Disorder in Protein Structure and Function - Session Introduction. - C. Kissinger; A. Keith Dunker; Eugene I. Shakhnovich (Pacific Symposium on Biocomputing, 1999)

Intelligent Data Analysis for Protein Disorder Prediction. - Pedro Romero; Zoran Obradovic; A. Keith Dunker (Artif. Intell. Rev., 2000)

Disorder and Flexibility in Protein Structure and Function - Session Introduction. - Clay Bracken; Malin M. Young; A. Keith Dunker (Pacific Symposium on Biocomputing, 2001)

The Protein Non-Folding Problem: Amino Acid Determinants of Intrinsic Order and Disorder. - R. M. Williams; Zoran Obradovic; V. Mathura; W. Braun; E. C. Garner; J. Young; S. Takayama; Celeste J. Brown; A. Keith Dunker (Pacific Symposium on Biocomputing, 2001)

Improving Sequence Alignments For Intrinsically Disordered Proteins. - Predrag Radivojac; Zoran Obradovic; Celeste J. Brown; A. Keith Dunker (Pacific Symposium on Biocomputing, 2002)

Preface. - Russ B. Altman; A. Keith Dunker; Lawrence Hunter; Teri E. Klein (Pacific Symposium on Biocomputing, 2003)

Special Paper - Introduction. - Russ B. Altman; A. Keith Dunker; Lawrence Hunter; Teri E. Klein (Pacific Symposium on Biocomputing, 2003)

Prediction of Boundaries Between Intrinsically Ordered and Disordered Protein Regions. - Predrag Radivojac; Zoran Obradovic; Celeste J. Brown; A. Keith Dunker (Pacific Symposium on Biocomputing, 2003)

Feature Selection Filters Based on the Permutation Test. - Predrag Radivojac; Zoran Obradovic; A. Keith Dunker; Slobodan Vucetic (ECML, 2004)

Classification and knowledge discovery in protein databases. - Predrag Radivojac; Nitesh V. Chawla; A. Keith Dunker; Zoran Obradovic (J. Biomed. Informatics, 2004)

Intrinsic Disorder and Protein modifications: Building an SVM Predictor for Methylation. - Kenneth Daily; Predrag Radivojac; A. Keith Dunker (CIBCB, 2005)

Improving Protein Secondary-Structure Prediction by Predicting Ends of Secondary-Structure Segments. - Uros Midic; A. Keith Dunker; Zoran Obradovic (CIBCB, 2005)

DisProt: a database of protein disorder. - Slobodan Vucetic; Zoran Obradovic; Vladimir Vacic; Predrag Radivojac; Kang Peng; Lilia M. Iakoucheva; Marc S. Cortese; J. David Lawson; Celeste J. Brown; Jason G. Sikes; Crystal D. Newton; A. Keith Dunker (Bioinform., 2005)

Optimizing Long Intrinsic Disorder Predictors with Protein Evolutionary Information. - Kang Peng; Slobodan Vucetic; Predrag Radivojac; Celeste J. Brown; A. Keith Dunker; Zoran Obradovic (J. Bioinform. Comput. Biol., 2005)

Length-dependent prediction of protein intrinsic disorder. - Kang Peng; Predrag Radivojac; Slobodan Vucetic; A. Keith Dunker; Zoran Obradovic (BMC Bioinform., 2006)

Intrinsically Disordered Proteins: Predictions and Applications. - A. Keith Dunker; Christopher J. Oldfield; Jingwei Meng; Pedro Romero; Jack Y. Yang; Zoran Obradovic; Vladimir N. Uversky (BIBE, 2007)

Intrinsically Disordered Proteins: An Update. - A. Keith Dunker; Christopher J. Oldfield; Jingwei Meng; Pedro Romero; Jack Y. Yang; Zoran Obradovic; Vladimir N. Uversky (BIBE, 2007)

Intrinsically Disordered Proteins in Human Diseases. - Vladimir N. Uversky; Christopher J. Oldfield; A. Keith Dunker (BIBE, 2007)

Protein Intrinsic Disorder, Cell Signaling, Drug Discovery, and Alternative Splicing. - A. Keith Dunker (BIOCOMP, 2007)

Intrinsic Disorder in Protein-Protein Interaction Networks: Case Studies of Complexes Involving p53 and 14-3-3. - Christopher J. Oldfield; Jingwei Meng; Jack Y. Yang; Vladimir N. Uversky; A. Keith Dunker (BIOCOMP, 2007)

Composition Profiler: a tool for discovery and visualization of amino acid composition differences. - Vladimir Vacic; Vladimir N. Uversky; A. Keith Dunker; Stefano Lonardi (BMC Bioinform., 2007)

Exploring alternative knowledge representations for protein secondary-structure prediction. - Uros Midic; A. Keith Dunker; Zoran Obradovic (Int. J. Data Min. Bioinform., 2007)

DisProt: the Database of Disordered Proteins. - Megan Sickmeier; Justin A. Hamilton; Tanguy LeGall; Vladimir Vacic; Marc S. Cortese; Ágnes Tantos; Beáta Szabó; Peter Tompa; Jake Yue Chen; Vladimir N. Uversky; Zoran Obradovic; A. Keith Dunker (Nucleic Acids Res., 2007)

Malleable Machines in Transcription Regulation: The Mediator Complex. - Ágnes Tóth-Petróczy; Christopher J. Oldfield; István Simon; Yuichiro Takagi; A. Keith Dunker; Vladimir N. Uversky; Mónika Fuxreiter (PLoS Comput. Biol., 2008)

A New Machine Learning Approach for Protein Phosphorylation Site Prediction in Plants. - Jianjiong Gao; Ganesh Kumar Agrawal; Jay J. Thelen; Zoran Obradovic; A. Keith Dunker; Dong Xu 002 (BICoB, 2009)

Protein sequence alignment and structural disorder: a substitution matrix for an extended alphabet. - Uros Midic; A. Keith Dunker; Zoran Obradovic (KDD Workshop on Statistical and Relational Learning in Bioinformatics, 2009)

Archaic chaos: intrinsically disordered proteins in Archaea. - Bin Xue; Robert W. Williams; Christopher J. Oldfield; A. Keith Dunker; Vladimir N. Uversky (BMC Syst. Biol., 2010)

In-silico prediction of disorder content using hybrid sequence representation. - Marcin J. Mizianty; Tuo Zhang; Bin Xue; Yaoqi Zhou; A. Keith Dunker; Vladimir N. Uversky; Lukasz A. Kurgan (BMC Bioinform., 2011)

Session introduction. - Jianhan Chen; Jianlin Cheng; A. Keith Dunker (Pacific Symposium on Biocomputing, 2012)

Intrinsic Protein Disorder and Protein-Protein Interactions. - Wei-Lun Hsu; Christopher J. Oldfield; Jingwei Meng; Fei Huang; Bin Xue; Vladimir N. Uversky; Pedro Romero; A. Keith Dunker (Pacific Symposium on Biocomputing, 2012)

Subclassifying Disordered Proteins by the CH-CDF Plot Method. - Fei Huang; Christopher J. Oldfield; Jingwei Meng; Wei-Lun Hsu; Bin Xue; Vladimir N. Uversky; Pedro Romero; A. Keith Dunker (Pacific Symposium on Biocomputing, 2012)

MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins. - Fatemeh Miri Disfani; Wei-Lun Hsu; Marcin J. Mizianty; Christopher J. Oldfield; Bin Xue; A. Keith Dunker; Vladimir N. Uversky; Lukasz A. Kurgan (Bioinform., 2012)

D2P2: database of disordered protein predictions. - Matt E. Oates; Pedro Romero; Takashi Ishida 002; Mohamed F. Ghalwash; Marcin J. Mizianty; Bin Xue; Zsuzsanna Dosztányi; Vladimir N. Uversky; Zoran Obradovic; Lukasz A. Kurgan; A. Keith Dunker; Julian Gough (Nucleic Acids Res., 2013)

Improving protein order-disorder classification using charge-hydropathy plots. - Fei Huang; Christopher J. Oldfield; Bin Xue; Wei-Lun Hsu; Jingwei Meng; Xiaowen Liu; Li Shen 001; Pedro Romero; Vladimir N. Uversky; A. Keith Dunker (BMC Bioinform., 2014)

Advances in translational bioinformatics facilitate revealing the landscape of complex disease mechanisms. - Jack Y. Yang; A. Keith Dunker; Jun S. Liu; Xiang Qin; Hamid R. Arabnia; William Yang; Andrzej Niemierko; Zhongxue Chen; Zuojie Luo; Liangjiang Wang; Yunlong Liu; Dong Xu; et al. (BMC Bioinform., 2014)

Identification of genes and pathways involved in kidney renal clear cell carcinoma. - William Yang; Kenji Yoshigoe; Xiang Qin; Jun S. Liu; Jack Y. Yang; Andrzej Niemierko; Youping Deng; Yunlong Liu; A. Keith Dunker; Zhongxue Chen; Liangjiang Wang; Dong Xu; et al. (BMC Bioinform., 2014)

pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins. - Mihaly Varadi; Simone Kosol; Pierre Lebrun; Erica Valentini; Martin Blackledge; A. Keith Dunker; Isabella C. Felli; Julie D. Forman-Kay; Richard W. Kriwacki; Roberta Pierattelli; Joel L. Sussman; Dmitri I. Svergun; et al. (Nucleic Acids Res., 2014)

Erratum to: Improving protein order-disorder classification using charge-hydropathy plots. - Fei Huang; Christopher J. Oldfield; Bin Xue; Wei-Lun Hsu; Jingwei Meng; Xiaowen Liu; Li Shen 001; Pedro Romero; Vladimir N. Uversky; A. Keith Dunker (BMC Bioinform., 2015)

DisProt 7.0: a major update of the database of disordered proteins. - Damiano Piovesan; Francesco Tabaro; Ivan Micetic; Marco Necci; Federica Quaglia; Christopher J. Oldfield; Maria Cristina Aspromonte; Norman E. Davey; Radoslav Davidovic; Zsuzsanna Dosztányi; Arne Elofsson; Alessandra Gasparini; et al. (Nucleic Acids Res., 2017)

Identification of intrinsic disorder in complexes from Protein Data Bank. - Jianhong Zhou; Christopher J. Oldfield; Fei Huang; Wenying Yan; Bairong Shen; A. Keith Dunker (ICCABS, 2018)

Entropy, Fluctuations, and Disordered Proteins. - Eshel Faraggi; A. Keith Dunker; Robert L. Jernigan; Andrzej Kloczkowski (Entropy, 2019)

Biocomputing 2021: Proceedings of the Pacific Symposium, Kohala Coast, Hawaii, USA, January 3-7, 2021 - Russ B. Altman; A. Keith Dunker; Lawrence Hunter; Marylyn D. Ritchie; Tiffany Murray; Teri E. Klein (PSB, 2020)

Many-to-One Binding by Intrinsically Disordered Protein Regions. - Wei-Lun Alterovitz; Eshel Faraggi; Christopher J. Oldfield; Jingwei Meng; Bin Xue; Fei Huang; Pedro Romero; Andrzej Kloczkowski; Vladimir N. Uversky; A. Keith Dunker (PSB, 2020)

Session Introduction. - Lukasz A. Kurgan; Predrag Radivojac; Joel L. Sussman; A. Keith Dunker (PSB, 2020)

DisProt: intrinsic protein disorder annotation in 2020. - András Hatos; Borbála Hajdu-Soltész; Alexander Miguel Monzon; Nicolas Palopoli; Lucía Álvarez; Burcu Aykaç Fas; Claudio Bassot; Guillermo I. Benítez; Martina Bevilacqua; Anastasia Chasapi; Lucía B. Chemes; Norman E. Davey; et al. (Nucleic Acids Res., 2020)

AI for infectious disease modelling and therapeutics. - Gil Alterovitz; Wei-Lun Alterovitz; Gail H. Cassell; Lixin Zhang 006; A. Keith Dunker (PSB, 2021)

Feasibility of the vaccine development for SARS-CoV-2 and other viruses using the shell disorder analysis. - Gerard Kian-Meng Goh; A. Keith Dunker; James A. Foster; Vladimir N. Uversky (PSB, 2021)

DescribePROT: database of amino acid-level protein structure and function predictions. - Bi Zhao; Akila Katuwawala; Christopher J. Oldfield; A. Keith Dunker; Eshel Faraggi; Jörg Gsponer; Andrzej Kloczkowski; Nawar Malhis; Milot Mirdita; Zoran Obradovic; Johannes Söding; Martin Steinegger; et al. (Nucleic Acids Res., 2021)

Characterization of intrinsically disordered regions in proteins informed by human genetic diversity. - Shehab S. Ahmed; Zaara T. Rifat; Ruchi Lohia; Arthur J. Campbell; A. Keith Dunker; M. Sohel Rahman; Sumaiya Iqbal (PLoS Comput. Biol., 2022)