Evaluation of software impact designed for biomedical research: Are we measuring what's meaningful? - Awan Afiaz; Andrey Ivanov; John Chamberlin; David Hanauer; Candace Savonen; Mary J. Goldman; Martin Morgan; Michael Reich; Alexander Getka; Aaron Holmes; Sarthak Pati; Dan Knight; et al. (CoRR, 2023)

PipeVal: light-weight extensible tool for file validation. - Yash Patel; Arpi Beshlikyan; Madison Jordan; Gina Kim; Aaron Holmes; Takafumi N. Yamaguchi; Paul C. Boutros (Bioinform., 2024)

NFTest: automated testing of Nextflow pipelines. - Yash Patel; Chenghao Zhu; Takafumi N. Yamaguchi; Yuan Zhe Bugh; Mao Tian; Aaron Holmes; Sorel T. Fitz-Gibbon; Paul C. Boutros (Bioinform., 2024)