Disperse: a simple and efficient approach to parallel database searching. - Raphaël Clifford; Aaron J. Mackey (Bioinform., 2000)

CRP: Cleavage of Radiolabeled Phosphoproteins. - Aaron J. Mackey; Timothy A. J. Haystead; William R. Pearson (Nucleic Acids Res., 2003)

SynView: a GBrowse-compatible approach to visualizing comparative genome data. - Haiming Wang; Yanqi Su; Aaron J. Mackey; Eileen T. Kraemer; Jessica C. Kissinger (Bioinform., 2006)

OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups. - Feng Chen; Aaron J. Mackey; Christian J. Stoeckert Jr.; David S. Roos (Nucleic Acids Res., 2006)

Evigan: a hidden variable model for integrating gene evidence for eukaryotic gene prediction. - Qian Liu; Aaron J. Mackey; David S. Roos; Fernando C. N. Pereira (Bioinform., 2008)

ToxoDB: an integrated Toxoplasma gondii database resource. - Bindu Gajria; Amit Bahl; John Brestelli; Jennifer Dommer; Steve Fischer; Xin Gao 002; Mark Heiges; John Iodice; Jessica C. Kissinger; Aaron J. Mackey; Deborah F. Pinney; David S. Roos; et al. (Nucleic Acids Res., 2008)

BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity. - Brandi L. Cantarel; Daniel Weaver; Nathan McNeill; Jianhua Zhang; Aaron J. Mackey; Justin T. Reese (BMC Bioinform., 2014)