Quantitative Structure-Mutation-Activity Relationship Tests (QSMART) model for protein kinase inhibitor response prediction. - Liang-Chin Huang; Wayland Yeung; Ye Wang; Huimin Cheng; Aarya Venkat; Sheng Li 001; Ping Ma; Khaled Rasheed; Natarajan Kannan (BMC Bioinform., 2020)

KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases. - Liang-Chin Huang; Rahil Taujale; Nathan Gravel; Aarya Venkat; Wayland Yeung; Dominic P. Byrne; Patrick A. Eyers; Natarajan Kannan (BMC Bioinform., 2021)

Responses to 10 common criticisms of anti-racism action in STEMM. - Maya L. Gosztyla; Lydia Kwong; Naomi A. Murray; Claire E. Williams; Nicholas Behnke; Porsia Curry; Kevin D. Corbett; Karen N. DSouza; Julia Gala de Pablo; Joanina Gicobi; Monica Javidnia; Navina Lotay; et al. (PLoS Comput. Biol., 2021)

XAI meets Biology: A Comprehensive Review of Explainable AI in Bioinformatics Applications. - Zhongliang Zhou; Mengxuan Hu; Mariah Salcedo; Nathan Gravel; Wayland Yeung; Aarya Venkat; Dongliang Guo 002; Jielu Zhang; Natarajan Kannan; Sheng Li 001 (CoRR, 2023)

Tree visualizations of protein sequence embedding space enable improved functional clustering of diverse protein superfamilies. - Wayland Yeung; Zhongliang Zhou; Liju Mathew; Nathan Gravel; Rahil Taujale; Brady O'boyle; Mariah Salcedo; Aarya Venkat; William Lanzilotta; Sheng Li 001; Natarajan Kannan (Briefings Bioinform., 2023)