An Efficient Algorithm for the Identification of Repetitive Variable Motifs in the Regulatory Sequences of Co-expressed Genes. - Abanish Singh; Nikola Stojanovic (ISCIS, 2006)

Micro-repetitive Structure of Genomic Sequences and the Identification of Ancient Repeat Elements. - Abanish Singh; Cédric Feschotte; Nikola Stojanovic (BIBM, 2007)

A study of the repetitive structure and distribution of short motifs in human genomic sequences. - Abanish Singh; Cédric Feschotte; Nikola Stojanovic (Int. J. Bioinform. Res. Appl., 2007)

Genome-wide search for putative transcriptional modules in eukaryotic sequences. - Abanish Singh; Nikola Stojanovic (BIOCOMP, 2009)

An algorithm for the reconstruction of consensus sequences of ancient segmental duplications and transposon copies in eukaryotic genomes. - Abanish Singh; Umeshkumar Keswani; David Levine; Cédric Feschotte; Nikola Stojanovic (Int. J. Bioinform. Res. Appl., 2010)

SVA: software for annotating and visualizing sequenced human genomes. - Dongliang Ge; Elizabeth K. Ruzzo; Kevin V. Shianna; Min He; Kimberly Pelak; Erin L. Heinzen; Anna C. Need; Elizabeth T. Cirulli; Jessica M. Maia; Samuel P. Dickson; Mingfu Zhu; Abanish Singh; et al. (Bioinform., 2011)