ZSeq 2.0: A fully automatic preprocessing method for next generation sequencing data. - Abed Alkhateeb; Iman Rezaeian; Luis Rueda 001 (BIBM, 2015)

Obtaining biomarkers in cancer progression from outliers of time-series clusters. - Abed Alkhateeb; Iman Rezaeian; Siva Singireddy; Luis Rueda 001 (BIBM, 2015)

Identifying differentially expressed transcripts associated with prostate cancer progression using RNA-Seq and machine learning techniques. - Siva Singireddy; Abed Alkhateeb; Iman Rezaeian; Luis Rueda 001; Dora Cavallo-Medved; Lisa A. Porter (CIBCB, 2015)

A Machine Learning Model for Discovery of Protein Isoforms as Biomarkers. - Manal Alshehri; Iman Rezaeian; Abed Alkhateeb; Luis Rueda 001 (BCB, 2016)

Outlier Genes as Biomarkers of Breast Cancer Survivability in Time-Series Data. - Naveen Mangalakumar; Abed Alkhateeb; Huy Quang Pham; Luis Rueda 001; Alioune Ngom (BCB, 2017)

Machine Learning Model for Identifying Gene Biomarkers for Breast Cancer Treatment Survival. - Ashraf Abou Tabl; Abed Alkhateeb; Waguih H. ElMaraghy; Alioune Ngom (BCB, 2017)

A Deep Learning Model to Identify a Genomic Signature Driving Sporadic Colorectal Cancer in Young Adults. - Abed Alkhateeb; Nazia Fatima; Govindaraja Atikukke; Sabeena Misra; Luis Rueda 001 (BCB, 2019)