Fast Image Reconstruction Methods for Fully 3d Multispectral Optical Bioluminescence Tomography. - Sangtae Ahn; Abhijit J. Chaudhari; Felix Darvas; Charles A. Bouman; Richard M. Leahy (ISBI, 2007)

Posture Matching and Elastic Registration of a Mouse Atlas to Surface Topography Range Data. - Anand A. Joshi; Abhijit J. Chaudhari; Changqing Li; David W. Shattuck; Joyita Dutta; Richard M. Leahy; Arthur W. Toga (ISBI, 2009)

Morphometry for early monitoring of treatment response in rheumatoid arthritis. - Anand A. Joshi; Richard M. Leahy; Ramsey Derek Badawi; Abhijit J. Chaudhari (ISBI, 2013)

Using Global Illumination in Volume Visualization of Rheumatoid Arthritis CT Data. - Lin Zheng; Abhijit J. Chaudhari; Ramsey Derek Badawi; Kwan-Liu Ma (IEEE Computer Graphics and Applications, 2014)

Registration-Based Morphometry for Shape Analysis of the Bones of the Human Wrist. - Anand A. Joshi; Richard M. Leahy; Ramsey Derek Badawi; Abhijit J. Chaudhari (IEEE Trans. Medical Imaging, 2016)

WRIST: A WRist Image Segmentation Toolkit for carpal bone delineation from MRI. - Brent Foster; Anand A. Joshi; Marissa Borgese; Yasser Abdelhafez; Robert D. Boutin; Abhijit J. Chaudhari (Comput. Medical Imaging Graph., 2018)

Genetic Algorithm based L4 Identification and Psoas Segmentation. - Namitha V. Benjamin; Robert D. Boutin; Abhijit J. Chaudhari; Kwan-Liu Ma (BIOIMAGING, 2021)

Three-dimensional U-Net with transfer learning improves automated whole brain delineation from MRI brain scans of rats, mice, and monkeys. - Valerie A. Porter; Brad A. Hobson; Alita J. D'Almeida; Karen L. Bales; Pamela J. Lein; Abhijit J. Chaudhari (Comput. Biol. Medicine, 2025)