SIMoNe: Statistical Inference for MOdular NEtworks. - Julien Chiquet; Alexander Smith 003; Gilles Grasseau; Catherine Matias; Christophe Ambroise (Bioinform., 2009)

The CanOE Strategy: Integrating Genomic and Metabolic Contexts across Multiple Prokaryote Genomes to Find Candidate Genes for Orphan Enzymes. - Adam Alexander Thil Smith; Eugeni Belda; Alain Viari; Claudine Médigue; David Vallenet (PLoS Comput. Biol., 2012)

MicroScope - an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data. - David Vallenet; Eugeni Belda; Alexandra Calteau; Stéphane Cruveiller; Stefan Engelen; Aurélie Lajus; François Le Fèvre; Cyrille Longin; Damien Mornico; David Roche; Zoé Rouy; Gregory Salvignol; et al. (Nucleic Acids Res., 2013)