A 16-Core RISC Microprocessor with Network Extensions. - Vishnu Yalala; Derek Brasili; David Carlson; Adam Hughes; Anil Jain; Tim Kiszely; Kolar Kodandapani; Anand Varadharajan; Thucydides Xanthopoulos (ISSCC, 2006)

Applying Twister to Scientific Applications. - Bingjing Zhang; Yang Ruan; Tak-Lon Wu; Judy Qiu; Adam Hughes; Geoffrey C. Fox (CloudCom, 2010)

Hybrid cloud and cluster computing paradigms for life science applications. - Judy Qiu; Jaliya Ekanayake; Thilina Gunarathne; Jong Youl Choi; Seung-Hee Bae; Hui Li; Bingjing Zhang; Tak-Lon Wu; Yang Ruan; Saliya Ekanayake; Adam Hughes; Geoffrey C. Fox (BMC Bioinform., 2010)

A 32-core RISC microprocessor with network accelerators, power management and testability features. - Brian Miller; Derek Brasili; Tim Kiszely; Rob Kuhn; Rahul Mehrotra; Manan Salvi; Mandar Kulkarni; Anand Varadharajan; Shi-Huang Yin; William Lin; Adam Hughes; Bill Stysiack; et al. (ISSCC, 2012)

A Computational Framework for Plasmonic Nanobiosensing. - Adam Hughes (SciPy, 2012)

Interpolative multidimensional scaling techniques for the identification of clusters in very large sequence sets. - Adam Hughes; Yang Ruan; Saliya Ekanayake; Seung-Hee Bae; Qunfeng Dong; Mina Rho; Judy Qiu; Geoffrey C. Fox (BMC Bioinform., 2012)

Visualizing the Protein Sequence Universe. - Larissa Stanberry; Roger Higdon; Winston Haynes; Natali Kolker; William Broomall; Saliya Ekanayake; Adam Hughes; Yang Ruan; Judy Qiu; Eugene Kolker; Geoffrey C. Fox (Concurr. Comput. Pract. Exp., 2014)