Predicting Mortality in Critical Care Patients with Fungemia Using Structured and Unstructured Data. - Sally L. Baxter; Adam R. Klie; Bharanidharan Radha Saseendrakumar; Gordon Y. Ye; Michael A. Hogarth; Shamim Nemati (EMBC, 2020)

Increasing metadata coverage of SRA BioSample entries using deep learning-based named entity recognition. - Adam R. Klie; Brian Tsui; Shamim Mollah; Dylan Skola; Michelle Dow; Chun-Nan Hsu; Hannah Carter (Database J. Biol. Databases Curation, 2021)

Predictive analyses of regulatory sequences with EUGENe. - Adam R. Klie; David Laub; James V. Talwar; Hayden Stites; Tobias Jores; Joe J. Solvason; Emma K. Farley; Hannah Carter (Nat. Comput. Sci., 2023)