Gemini: memory-efficient integration of hundreds of gene networks with high-order pooling. - Addie Woicik; Mingxin Zhang 008; Hanwen Xu; Sara Mostafavi; Sheng Wang 012 (Bioinform., 2023)

BLIAM: Literature-based Data Synthesis for Synergistic Drug Combination Prediction. - Cai Yang; Addie Woicik; Hoifung Poon; Sheng Wang (CoRR, 2023)

Extrapolating heterogeneous time-series gene expression data using Sagittarius. - Addie Woicik; Mingxin Zhang 008; Janelle Chan; Jianzhu Ma; Sheng Wang 012 (Nat. Mac. Intell., 2023)

Multi-Artifact Detection and Filtering in Digital Pathology Using Intrinsic Image Properties. - Varun Kanwar; Addie Woicik; Benjamin Dulken; Christopher Probert; Zachary R. McCaw (ISBI, 2024)

In Silico Optimization of Tissue Microarray Design for Machine Learning Analysis. - Addie Woicik; Zachary R. McCaw; Santiago Akle; Benjamin Dulken; Sanjana Narayanan; Christopher Probert (ISBI, 2024)

Enhancing Hi-C contact matrices for loop detection with Capricorn: a multiview diffusion model. - Tangqi Fang; Yifeng Liu 004; Addie Woicik; Minsi Lu; Anupama Jha; Xiao Wang 013; Gang Li 034; Borislav H. Hristov; Zixuan Liu 001; Hanwen Xu; William S. Noble; Sheng Wang 012 (Bioinform., 2024)

OCTCube: A 3D foundation model for optical coherence tomography that improves cross-dataset, cross-disease, cross-device and cross-modality analysis. - Zixuan Liu 001; Hanwen Xu; Addie Woicik; Linda G. Shapiro; Marian Blazes; Yue Wu; Cecilia S. Lee; Aaron Y. Lee; Sheng Wang 012 (CoRR, 2024)