SnakeLines Workflow for SARS-CoV-2 Variant Detection from Next-Generation Sequencing Reads. - Adrian Goga; Miroslav Böhmer; Rastislav Hekel; Werner Krampl; Bronislava Brejová; Tomás Vinar; Jaroslav Budis; Tomás Szemes (ITAT, 2021)

SnakeLines: integrated set of computational pipelines for sequencing reads. - Jaroslav Budis; Werner Krampl; Marcel Kucharík; Rastislav Hekel; Adrian Goga; Michal Lichvár; David Smolak; Miroslav Böhmer; Andrej Baláz; Frantisek Duris; Juraj Gazdarica; Katarina Soltys; et al. (CoRR, 2021)

Prefix-Free Parsing for Building Large Tunnelled Wheeler Graphs. - Adrián Goga; Andrej Baláz (WABI, 2022)

MARIA: Multiple-alignment r-index with aggregation. - Adrián Goga; Andrej Baláz; Alessia Petescia; Travis Gagie (CoRR, 2022)

Faster Maximal Exact Matches with Lazy LCP Evaluation. - Adrián Goga; Lore Depuydt; Nathaniel K. Brown; Jan Fostier; Travis Gagie; Gonzalo Navarro 001 (DCC, 2024)

Wheeler Maps. - Andrej Baláz; Travis Gagie; Adrián Goga; Simon Heumos; Gonzalo Navarro 001; Alessia Petescia; Jouni Sirén (LATIN (1), 2024)

Space-Efficient Conversions from SLPs. - Travis Gagie; Adrián Goga; Artur Jez; Gonzalo Navarro 001 (LATIN (1), 2024)

SnakeLines: integrated set of computational pipelines for sequencing reads. - Jaroslav Budis; Werner Krampl; Marcel Kucharík; Rastislav Hekel; Adrián Goga; Jozef Sitarcík; Michal Lichvár; David Smolak; Miroslav Böhmer; Andrej Baláz; Frantisek Duris; Juraj Gazdarica; et al. (J. Integr. Bioinform., 2024)