ASAP: a web-based platform for the analysis and interactive visualization of single-cell RNA-seq data. - Vincent Gardeux; Fabrice P. A. David; Adrian Shajkofci; Petra C. Schwalie; Bart Deplancke (Bioinform., 2017)

Semi-Blind Spatially-Variant Deconvolution in Optical Microscopy with Local Point Spread Function Estimation by Use of Convolutional Neural Networks. - Adrian Shajkofci; Michael Liebling (ICIP, 2018)

DeepFocus: A Few-Shot Microscope Slide Auto-Focus Using a Sample Invariant CNN-Based Sharpness Function. - Adrian Shajkofci; Michael Liebling (ISBI, 2020)

Free annotated data for deep learning in microscopy? A hitchhiker's guide. - Adrian Shajkofci; Michael Liebling (CoRR, 2020)

Spatially-Variant CNN-based Point Spread Function Estimation for Blind Deconvolution and Depth Estimation. - Adrian Shajkofci; Michael Liebling (CoRR, 2020)

Spatially-Variant CNN-Based Point Spread Function Estimation for Blind Deconvolution and Depth Estimation in Optical Microscopy. - Adrian Shajkofci; Michael Liebling (IEEE Trans. Image Process., 2020)

Estimating Nonplanar Flow From 2D Motion-Blurred Widefield Microscopy Images Via Deep Learning. - Adrian Shajkofci; Michael Liebling (ISBI, 2021)