Jllumina - A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing. - Diogo Almeida; Ida Skov; Jesper Lund; Afsaneh Mohammadnejad; Artur Silva; Fabio Vandin; Qihua Tan; Jan Baumbach; Richard Röttger (J. Integr. Bioinform., 2016)

Weighted gene co-expression network analysis of microarray mRNA expression profiling in response to electroacupuncture. - Afsaneh Mohammadnejad; Shuxia Li; Hongmei Duan; Jesper Lund; Weilong Li; Jan Baumbach; Qihua Tan (BIBM, 2018)