BALCONY: an R package for MSA and functional compartments of protein variability analysis. - Alicja Pluciennik; Michal Stolarczyk; Maria Bzówka; Agata Raczynska; Tomasz Magdziarz; Artur Góra (BMC Bioinform., 2018)

AQUA-DUCT 1.0: structural and functional analysis of macromolecules from an intramolecular voids perspective. - Tomasz Magdziarz; Karolina Mitusinska; Maria Bzówka; Agata Raczynska; Agnieszka Stanczak; Michal Banas; Weronika Bagrowska; Artur Góra (Bioinform., 2020)

Evolution of tunnels in α/β-hydrolase fold proteins - What can we learn from studying epoxide hydrolases? - Maria Bzówka; Karolina Mitusinska; Agata Raczynska; Tomasz Skalski; Aleksandra Samol; Weronika Bagrowska; Tomasz Magdziarz; Artur Góra (PLoS Comput. Biol., 2022)