iPBA: a tool for protein structure comparison using sequence alignment strategies. - Jean-Christophe Gelly; Agnel Praveen Joseph; Narayanaswamy Srinivasan; Alexandre G. de Brevern (Nucleic Acids Res., 2011)

3PFDB+: improved search protocol and update for the identification of representatives of protein sequence domain families. - Agnel Praveen Joseph; Prashant Shingate; Atul Kumar Upadhyay; Ramanathan Sowdhamini (Database J. Biol. Databases Curation, 2014)

iPBAvizu: a PyMOL plugin for an efficient 3D protein structure superimposition approach. - Guilhem Faure; Agnel Praveen Joseph; Pierrick Craveur; Tarun J. Narwani; Narayanaswamy Srinivasan; Jean-Christophe Gelly; Joseph Rebehmed; Alexandre G. de Brevern (Source Code Biol. Medicine, 2019)

Comparing Cryo-EM Reconstructions and Validating Atomic Model Fit Using Difference Maps. - Agnel Praveen Joseph; Ingvar C. Lagerstedt; Arjen Jakobi; Tom Burnley; Ardan Patwardhan; Maya Topf; Martyn Winn (J. Chem. Inf. Model., 2020)