Comparative Study of Topological Indices of Macro/Supramolecular RNA Complex Networks. - Guillermín Agüero-Chapín; Agostinho Antunes; Florencio M. Ubeira; Kuo-Chen Chou; Humberto González Díaz (J. Chem. Inf. Model., 2008)

An alignment-free approach for eukaryotic ITS2 annotation and phylogenetic inference. - Guillermín Agüero-Chapín; Aminael Sánchez-Rodríguez; Pedro I. Hidalgo-Yanes; Yunierkis Pérez-Castillo; Reinaldo Molina Ruiz; Kathleen Marchal; Vítor V. Vasconcelos; Agostinho Antunes (IWBBIO, 2013)

LMAP: Lightweight Multigene Analyses in PAML. - Emanuel Maldonado; Daniela Almeida; Tibisay Escalona; Imran Khan 002; Vítor V. Vasconcelos; Agostinho Antunes (BMC Bioinform., 2016)

Exploring general-purpose protein features for distinguishing enzymes and non-enzymes within the twilight zone. - Yasser B. Ruiz-Blanco; Guillermín Agüero-Chapín; Enrique García-Hernández; Orlando Álvarez; Agostinho Antunes; James Green 001 (BMC Bioinform., 2017)

Surveying alignment-free features for Ortholog detection in related yeast proteomes by using supervised big data classifiers. - Deborah Galpert; Alberto Fernández 001; Francisco Herrera; Agostinho Antunes; Reinaldo Molina Ruiz; Guillermín Agüero-Chapín (BMC Bioinform., 2018)

Measuring phylogenetic signal between categorical traits and phylogenies. - Rui Borges; João Paulo Machado; Cidália Gomes; Ana Paula Rocha 002; Agostinho Antunes (Bioinform., 2019)

LMAP_S: Lightweight Multigene Alignment and Phylogeny eStimation. - Emanuel Maldonado; Agostinho Antunes (BMC Bioinform., 2019)

Data Employed in the Construction of a Composite Protein Database for Proteogenomic Analyses of Cephalopods Salivary Apparatus. - Daniela Almeida; Dany Domínguez-Pérez; Ana Matos; Guillermín Agüero-Chapín; Yuselis Castaño; Vítor V. Vasconcelos; Alexandre Campos; Agostinho Antunes (Data, 2020)

Comparative evaluation of multiomics integration tools for the study of prediabetes: insights into the earliest stages of type 2 diabetes mellitus. - Mohamed Emam; Ahmed Tarek; Mohamed Soudy; Agostinho Antunes; Mohamed El-Hadidi; Mohamed Hamed (Netw. Model. Anal. Health Informatics Bioinform., 2024)