Ecosystems Monitoring: An Information Extraction and Event Processing Scientific Workflow. - Ahmed Abdeen Hamed; Byung Suk Lee 001; Anne E. Thessen (SERVICES, 2010)

Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features. - Artemy Kolchinsky; Alaa Abi-Haidar; Jasleen Kaur 002; Ahmed Abdeen Hamed; Luis Mateus Rocha (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

T-Recs: Time-aware Twitter-based Drug Recommender System. - Ahmed Abdeen Hamed; Rebecca Roose; Marlon Branicki; Alan Rubin (ASONAM, 2012)

A Twitter-based smoking cessation recruitment system. - Ahmed Abdeen Hamed; Xindong Wu 001; James R. Fingar (ASONAM, 2013)

Mining patterns in Big Data K-H networks. - Ahmed Abdeen Hamed; Xindong Wu 001; Tamer Fandy (AICCSA, 2014)

Does Social Media Big Data Make the World Smaller? An Exploratory Analysis of Keyword-Hashtag Networks. - Ahmed Abdeen Hamed; Xindong Wu 001 (BigData Congress, 2014)

A twitter recruitment intelligent system: association rule mining for smoking cessation. - Ahmed Abdeen Hamed; Xindong Wu 001; Alan Rubin (Soc. Netw. Anal. Min., 2014)

Mining Climate Change Awareness on Twitter: A PageRank Network Analysis Method. - Ahmed Abdeen Hamed; Asim Zia (ICCSA (1), 2015)

Measuring climate change on Twitter using Google's algorithm: perception and events. - Ahmed Abdeen Hamed; Alexa A. Ayer; Eric M. Clark; Erin A. Irons; Grant T. Taylor; Asim Zia (Int. J. Web Inf. Syst., 2015)

Twitter K-H networks in action: Advancing biomedical literature for drug search. - Ahmed Abdeen Hamed; Xindong Wu 001; Robert Erickson; Tamer Fandy (J. Biomed. Informatics, 2015)

MolecRank: A Specificity-Based Network Analysis Algorithm - Ranking Therapeutic Molecules in the Bibliome. - Ahmed Abdeen Hamed; Agata Leszczynska; Mark Schreiber (AMLTA, 2019)

Mining Literature-Based Knowledge Graph for Predicting Combination Therapeutics: A COVID-19 Use Case. - Ahmed Abdeen Hamed; Jakub Jonczyk; Mohammad Zaiyan Alam; Ewa Deelman; Byung Suk Lee 001 (ICKG, 2022)

Establishing Trust in ChatGPT BioMedical Generated Text: An Ontology-Based Knowledge Graph to Validate Disease-Symptom Links. - Ahmed Abdeen Hamed; Alessandro Crimi; Magdalena M. Misiak; Byung Suk Lee 001 (CoRR, 2023)

Improving Detection of ChatGPT-Generated Fake Science Using Real Publication Text: Introducing xFakeBibs a Supervised-Learning Network Algorithm. - Ahmed Abdeen Hamed; Xindong Wu 001 (CoRR, 2023)

Fact-Checking Generative AI: Ontology-Driven Biological Graphs for Disease-Gene Link Verification. - Ahmed Abdeen Hamed; Alessandro Crimi; Byung Suk Lee 001; Magdalena M. Misiak (ICCS (4), 2024)

Quantifying Similarity: Text-Mining Approaches to Evaluate ChatGPT and Google Bard Content in Relation to BioMedical Literature. - Jakub Klimczak; Ahmed Abdeen Hamed (ICCS (5), 2024)

EsmTemp - Transfer Learning Approach for Predicting Protein Thermostability. - Adam Sulek; Jakub Jonczyk; Patryk Orzechowski; Ahmed Abdeen Hamed; Marek Wodzinski (ICCS (3), 2024)

23rd International Workshop on Data Mining in Bioinformatics (BIOKDD 2024). - Da Yan 001; Ahmed Abdeen Hamed; Jake Y. Chen; Mohammed J. Zaki (KDD, 2024)

Reinforcement of Explainability of ChatGPT Prompts by Embedding Breast Cancer Self-Screening Rules into AI Responses. - Yousef Khan; Ahmed Abdeen Hamed (CoRR, 2024)

Accelerating Complex Disease Treatment through Network Medicine and GenAI: A Case Study on Drug Repurposing for Breast Cancer. - Ahmed Abdeen Hamed; Tamer E. Fandy (CoRR, 2024)

From Knowledge Generation to Knowledge Verification: Examining the BioMedical Generative Capabilities of ChatGPT. - Ahmed Abdeen Hamed; Byung Suk Lee 001 (CoRR, 2025)