An algorithm for line matching in an image by mapping into an n-dimensional vector space. - Raiymbek Sultanov; Ahmet Atakan; Rita Ismailova (Turkish J. Electr. Eng. Comput. Sci., 2019)

SLPred: a multi-view subcellular localization prediction tool for multi-location human proteins. - Gökhan Özsari; Ahmet Süreyya Rifaioglu; Ahmet Atakan; Tunca Dogan; Maria Jesus Martin; Rengül Çetin-Atalay; Volkan Atalay (Bioinform., 2022)

Transfer learning for drug-target interaction prediction. - Alperen Dalkiran; Ahmet Atakan; Ahmet Süreyya Rifaioglu; Maria Jesus Martin; Rengül Çetin-Atalay; Aybar C. Acar; Tunca Dogan; Volkan Atalay (Bioinform., 2023)

ProFAB - open protein functional annotation benchmark. - A Samet Özdilek; Ahmet Atakan; Gökhan Özsari; Aybar C. Acar; M. Volkan Atalay; Tunca Dogan; Ahmet Süreyya Rifaioglu (Briefings Bioinform., 2023)