Learning transcriptional networks from the integration of ChIP-chip and expression data in a non-parametric model. - Ahrim Youn; David J. Reiss; Werner Stuetzle (Bioinform., 2010)

Identifying cancer driver genes in tumor genome sequencing studies. - Ahrim Youn; Richard Simon (Bioinform., 2011)

Estimating the order of mutations during tumorigenesis from tumor genome sequencing data. - Ahrim Youn; Richard Simon (Bioinform., 2012)

Using passenger mutations to estimate the timing of driver mutations and identify mutator alterations. - Ahrim Youn; Richard Simon (BMC Bioinform., 2013)