Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure. - Zafer Aydin; Ajit P. Singh; Jeff A. Bilmes; William Stafford Noble (BMC Bioinform., 2011)

Spectrum Identification using a Dynamic Bayesian Network Model of Tandem Mass Spectra. - Ajit P. Singh; John T. Halloran; Jeff A. Bilmes; Katrin Kirchhoff; William Stafford Noble (UAI, 2012)

On Bisubmodular Maximization. - Ajit P. Singh; Andrew Guillory; Jeff A. Bilmes (AISTATS, 2012)