EpitopeVec: linear epitope prediction using deep protein sequence embeddings. - Akash Bahai; Ehsaneddin Asgari; Mohammad R. K. Mofrad; Andreas Kloetgen; Alice C. McHardy (Bioinform., 2021)

Computational methods for characterizing viral neutralization data and predicting linear B-cell epitopes (Computergestützte Methoden zur Charakterisierung viraler Neutralisierungsdaten und Vorhersage linearer B-Zell-Epitope) - Akash Bahai (2022)

Systematic benchmarking of deep-learning methods for tertiary RNA structure prediction. - Akash Bahai; Chee Keong Kwoh 001; Yuguang Mu; Yinghui Li (PLoS Comput. Biol., 2024)