Description des outils (mathematiques, linguistiques et informatiques) impliques par la construction d'une chaine automatique integree de traitement de l'information textuelle et graphique. - Andrée Borillo; Mario Borillo; L. Bourrelly; Eugène Chouraqui; Wenceslas Fernandez de la Vega; A. Guénoche; A. Hesnard; J. Tognotti; Jacques Virbel (Inf. Storage Retr., 1973)

Enumeration des tableaux standards. - Alain Guénoche (Discret. Math., 1979)

L'Interrogation des banques de donneées en langage naturel dans une démarche cognitive complex. - A. Guénoche; Jacques Virbel (Inf. Process. Manag., 1979)

Random Spanning Tree. - A. Guénoche (J. Algorithms, 1983)

Typologie d'amphores romaines par une methode logique de classification. - Alain Guénoche; A. Hesnard (Comput. Humanit., 1983)

Méthodes d'induction dans les bases de données. - Alain Guénoche (RIAO, 1985)

Graphical representation of a boolean array. - Alain Guénoche (Comput. Humanit., 1986)

Trees and proximity representations. - Jean-Pierre Barthélemy; Alain Guénoche (Wiley, 1991)

Can we recover a sequence, just knowing all its subsequences of given length? - A. Guénoche (Comput. Appl. Biosci., 1992)

Enumération des partitions de diamètre minimum. - A. Guénoche (Discret. Math., 1993)

How to Choose According to Partial Evaluations? - A. Guénoche (IPMU, 1994)

Order distances in tree reconstruction. - Alain Guénoche (Mathematical Hierarchies and Biology, 1996)

New results on the computation of median orders. - Irène Charon; A. Guénoche; Olivier Hudry; Frédéric Woirgard (Discret. Math., 1997)

Ordinal properties of tree distances. - A. Guénoche (Discret. Math., 1998)

Twelve Numerical, Symbolic and Hybrid Supervised Classification Methods. - Olivier Gascuel; Bernadette Bouchon-Meunier; Gilles Caraux; Patrick Gallinari; Alain Guénoche; Yann Guermeur; Yves Lechevallier; Christophe Marsala; Laurent Miclet; Jacques Nicolas; Richard Nock; Mohammed Ramdani 003; et al. (Int. J. Pattern Recognit. Artif. Intell., 1998)

Can We Have Confidence in a Tree Representation? - Alain Guénoche; Henri Garreta (JOBIM, 2000)

Generalized trees related with tree metrics. - Alain Guénoche; Bruno Leclerc; Vladimir Makarenkov (Electron. Notes Discret. Math., 2000)

The triangles method to build X-trees from incomplete distance matrices. - Alain Guénoche; Bruno Leclerc (RAIRO Oper. Res., 2001)

Clustering proteins from interaction networks for the prediction of cellular functions. - Marie-Christine Brun; Carl Herrmann; Alain Guénoche (BMC Bioinform., 2004)

On the extension of a partial metric to a tree metric. - Alain Guénoche; Bruno Leclerc; Vladimir Makarenkov (Discret. Math., 2004)

Supersequences of Masks for Oligo-chips. - Alain Guénoche (J. Bioinform. Comput. Biol., 2004)

About the design of oligo-chips. - A. Guénoche (Discret. Appl. Math., 2005)

Comparing recent methods in graph partitioning. - A. Guénoche (Electron. Notes Discret. Math., 2005)

PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks. - Anaïs Baudot; David Martin 003; Pierre Mouren; François Chevenet; Alain Guénoche; Bernard Jacq; Marie-Christine Brun (Bioinform., 2006)

Maximum Transfer Distance Between Partitions. - Irène Charon; Lucile Denoeud; Alain Guénoche; Olivier Hudry (J. Classif., 2006)

Comparison of Distance Indices Between Partitions. - Lucile Denoeud; Alain Guénoche (Data Science and Classification, 2006)

Two local dissimilarity measures for weighted graphs with application to protein interaction networks. - Jean-Baptiste Angelelli; Anaïs Baudot; Marie-Christine Brun; Alain Guénoche (Adv. Data Anal. Classif., 2008)

Defining a Modular Signalling Network from the Fly Interactome. - Anaïs Baudot; Jean-Baptiste Angelelli; Alain Guénoche; Bernard Jacq; Christine Brun (BMC Syst. Biol., 2008)

Comparing bacterial genomes from linear orders of patterns. - Frédéric Guyon; Alain Guénoche (Discret. Appl. Math., 2008)

Comparison of algorithms in graph partitioning. - Alain Guénoche (RAIRO Oper. Res., 2008)

Comparison of alignment free string distances for complete genome phylogeny. - Frédéric Guyon; Céline Brochier-Armanet; Alain Guénoche (Adv. Data Anal. Classif., 2009)

Making Decisions in Multi Partitioning. - Alain Guénoche (ADT, 2011)

Consensus of partitions : a constructive approach. - Alain Guénoche (Adv. Data Anal. Classif., 2011)

TreeOfTrees Method to Evaluate the Congruence Between Gene Trees. - Pierre Darlu; Alain Guénoche (J. Classif., 2011)

Bootstrap clustering for graph partitioning. - Philippe Gambette; Alain Guénoche (RAIRO Oper. Res., 2011)

Multifunctional proteins revealed by overlapping clustering in protein interaction network. - Emmanuelle Becker; Benoît Robisson; Charles E. Chapple; Alain Guénoche; Marie-Christine Brun (Bioinform., 2012)

Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters. - Lionel Spinelli; Philippe Gambette; Charles E. Chapple; Benoît Robisson; Anaïs Baudot; Henri Garreta; Laurent Tichit; Alain Guénoche; Christine Brun (Biosyst., 2013)

Multiple consensus trees: a method to separate divergent genes. - Alain Guénoche (BMC Bioinform., 2013)

Méta-analyse ordinale d'enquêtes d'opinion Application aux usages de l'Internet des objets en entreprise. - Rostand Affogbolo; Claire Gauzente; Alain Guénoche; Pascale Kuntz (EGC, 2018)