Specific empirical free energy function for automated docking of carbohydrates to proteins. - Alain Laederach; Peter J. Reilly (J. Comput. Chem., 2003)

Computational functional genomics. - Mike P. Liang; Olga G. Troyanskaya; Alain Laederach; Douglas L. Brutlag; Russ B. Altman (IEEE Signal Process. Mag., 2004)

Informatics challenges in structured RNA. - Alain Laederach (Briefings Bioinform., 2007)

Exhaustive Enumeration of Kinetic Model Topologies for the Analysis of Time-Resolved RNA Folding. - Joshua S. Martin; Katrina Simmons; Alain Laederach (Algorithms, 2009)

Evolutionary Evidence for Alternative Structure in RNA Sequence Co-variation. - Justin Ritz; Joshua S. Martin; Alain Laederach (PLoS Comput. Biol., 2013)

Identifying functional SNVs that map to non-coding regions of the genome and alter RNA Structure. - Alain Laederach (IWBBIO, 2014)

Session Introduction. - Drena Dobbs; Steven E. Brenner; Vasant G. Honavar; Robert L. Jernigan; Alain Laederach; Quaid Morris (PSB, 2016)

Classification of RNA structure change by 'gazing' at experimental data. - Chanin Tolson Woods; Alain Laederach (Bioinform., 2017)

Identifying proximal RNA interactions from cDNA-encoded crosslinks with ShapeJumper. - Thomas W. Christy; Catherine A. Giannetti; Alain Laederach; Kevin M. Weeks (PLoS Comput. Biol., 2021)