Identification of clustered microRNAs using an ab initio prediction method. - Alain Sewer; Nicodème Paul; Pablo Landgraf; Alexei Aravin; Sébastien Pfeffer; Michael J. Brownstein; Thomas Tuschl; Erik van Nimwegen; Mihaela Zavolan (BMC Bioinform., 2005)

Assessment of network perturbation amplitudes by applying high-throughput data to causal biological networks. - Florian Martin 002; Ty M. Thomson; Alain Sewer; David A. Drubin; Carole Mathis; Dirk Weisensee; Dexter Pratt; Julia Hoeng; Manuel C. Peitsch (BMC Syst. Biol., 2012)

Quantification of biological network perturbations for mechanistic insight and diagnostics using two-layer causal models. - Florian Martin 002; Alain Sewer; Marja Talikka; Yang Xiang; Julia Hoeng; Manuel C. Peitsch (BMC Bioinform., 2014)

The systems toxicology challenge: how to leverage omics data to predict mechanisms of toxicity? - Nikolai V. Ivanov; Carine Poussin; Stéphanie Boué; Florian Martin 002; Alain Sewer; Bjoern Titz; Manuel C. Peitsch; Julia Hoeng (BCB, 2015)

Causal biological network database: a comprehensive platform of causal biological network models focused on the pulmonary and vascular systems. - Stéphanie Boué; Marja Talikka; Jurjen Willem Westra; William Hayes; Anselmo Di Fabio; Jennifer Park; Walter K. Schlage; Alain Sewer; Brett Fields; Sam Ansari; Florian Martin 002; Emilija Veljkovic; et al. (Database J. Biol. Databases Curation, 2015)