RASS: a web server for RNA alignment in the joint sequence-structure space. - Gewen He; Albert Steppi; Jose Laborde; Anuj Srivastava; Peixiang Zhao 001; Jinfeng Zhang (Nucleic Acids Res., 2014)

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine. - Rezarta Islamaj Dogan; Sun Kim; Andrew Chatr-aryamontri; Chih-Hsuan Wei; Donald C. Comeau; Rui Antunes 002; Sérgio Matos; Qingyu Chen 001; Aparna Elangovan; Nagesh C. Panyam; Karin Verspoor; Hongfang Liu; et al. (Database J. Biol. Databases Curation, 2019)

Adeft: Acromine-based Disambiguation of Entities from Text with applications to the biomedical literature. - Albert Steppi; Benjamin M. Gyori; John A. Bachman (J. Open Source Softw., 2020)

AlgoTune: Can Language Models Speed Up General-Purpose Numerical Programs? - Ori Press; Brandon Amos; Haoyu Zhao; Yikai Wu; Samuel K. Ainsworth; Dominik Krupke; Patrick Kidger; Touqir Sajed; Bartolomeo Stellato; Jisun Park; Nathanael Bosch; Eli Meril; et al. (CoRR, 2025)