sdef: an R package to synthesize lists of significant features in related experiments. - Marta Blangiardo; Alberto Cassese; Sylvia Richardson (BMC Bioinform., 2010)

Time-dependence of graph theory metrics in functional connectivity analysis. - Sharon Chiang; Alberto Cassese; Michele Guindani; Marina Vannucci; Hsiang J. Yeh; Zulfi Haneef; John M. Stern (NeuroImage, 2016)

A Network Biology Approach Identifies Molecular Cross-Talk between Normal Prostate Epithelial and Prostate Carcinoma Cells. - Victor Trevino; Alberto Cassese; Zsuzsanna Nagy; Xiaodong Zhuang; John M. Herbert; Philipp Antzack; Kim Clarke; Nicholas Davies; Ayesha Rahman; Moray J. Campbell; Michele Guindani; Roy Bicknell; et al. (PLoS Comput. Biol., 2016)

REMAXINT: a two-mode clustering-based method for statistical inference on two-way interaction. - Zaheer Ahmed; Alberto Cassese; Gerard J. P. Van Breukelen; Jan Schepers (Adv. Data Anal. Classif., 2021)

E-ReMI: Extended Maximal Interaction Two-mode Clustering. - Zaheer Ahmed; Alberto Cassese; Gerard J. P. Van Breukelen; Jan Schepers (J. Classif., 2023)