Using a calibration experiment to assess gene-specific information: full Bayesian and empirical Bayesian models for two-channel microarray data. - Marta Blangiardo; Simona Toti; Betti Giusti; Rosanna Abbate; Alberto Magi; Filippo Poggi; Luciana Rossi; Francesca Torricelli; Annibale Biggeri (Bioinform., 2006)

Analysis of differential genes expression and characterization of genes networks. - Alberto Magi (2006)

Discovering chimeric transcripts in paired-end RNA-seq data by using EricScript. - Matteo Benelli; Chiara Pescucci; Giuseppina Marseglia; Marco Severgnini; Francesca Torricelli; Alberto Magi (Bioinform., 2012)

Read count approach for DNA copy number variants detection. - Alberto Magi; Lorenzo Tattini; Tommaso Pippucci; Francesca Torricelli; Matteo Benelli (Bioinform., 2012)

H3M2: detection of runs of homozygosity from whole-exome sequencing data. - Alberto Magi; Lorenzo Tattini; Flavia Palombo; Matteo Benelli; Alessandro Gialluisi; Betti Giusti; Rosanna Abbate; Marco Seri; Gian Franco Gensini; Giovanni Romeo; Tommaso Pippucci (Bioinform., 2014)

The Source of the Data Flood: Sequencing Technologies. - Alberto Magi; Nadia Pisanti; Lorenzo Tattini (ERCIM News, 2016)

Characterization of MinION nanopore data for resequencing analyses. - Alberto Magi; Betti Giusti; Lorenzo Tattini (Briefings Bioinform., 2017)

SLMSuite: a suite of algorithms for segmenting genomic profiles. - Valerio Orlandini; Aldesia Provenzano; Sabrina Giglio; Alberto Magi (BMC Bioinform., 2017)

Nanopore sequencing data analysis: state of the art, applications and challenges. - Alberto Magi; Roberto Semeraro; Alessandra Mingrino; Betti Giusti; Romina D'Aurizio (Briefings Bioinform., 2018)

Nano-GLADIATOR: real-time detection of copy number alterations from nanopore sequencing data. - Alberto Magi; Davide Bolognini; Niccoló Bartalucci; Alessandra Mingrino; Roberto Semeraro; Luna Giovannini; Stefania Bonifacio; Daniela Parrini; Elisabetta Pelo; Francesco Mannelli; Paola Guglielmelli; Alessandro Maria Vannucchi (Bioinform., 2019)

PyPore: a python toolbox for nanopore sequencing data handling. - Roberto Semeraro; Alberto Magi (Bioinform., 2019)

VISOR: a versatile haplotype-aware structural variant simulator for short- and long-read sequencing. - Davide Bolognini; Ashley D. Sanders; Jan O. Korbel; Alberto Magi; Vladimir Benes; Tobias Rausch (Bioinform., 2020)