Accounting for uncertainty when assessing association between copy number and disease: a latent class model. - Juan R. González; Isaac Subirana; Geòrgia Escaramís; Solymar Peraza; Alejandro Cáceres; Xavier Estivill; Lluís Armengol (BMC Bioinform., 2009)

Measuring fMRI reliability with the intra-class correlation coefficient. - Alejandro Cáceres; Deanna L. Hall; Fernando O. Zelaya; Steven C. R. Williams; Mitul A. Mehta (NeuroImage, 2009)

Effects of acute nicotine on brain function in healthy smokers and non-smokers: Estimation of inter-individual response heterogeneity. - Ulrich Ettinger; Steven C. R. Williams; Dhanesh Patel; Tanja M. Michel; Agwawumma Nwaigwe; Alejandro Cáceres; Mitul A. Mehta; Anantha P. Anilkumar; Veena Kumari (NeuroImage, 2009)

R-Gada: a fast and flexible pipeline for copy number analysis in association studies. - Roger Pique-Regi; Alejandro Cáceres; Juan R. González (BMC Bioinform., 2010)

MLPAstats: An R GUI package for the integrated analysis of copy number alterations using MLPA data. - Alejandro Cáceres; Lluís Armengol; Sergi Villatoro; Juan R. González (BMC Bioinform., 2011)

A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data. - Juan R. González; Benjamin Rodriguez-Santiago; Alejandro Cáceres; Roger Pique-Regi; Nathaniel Rothman; Stephen J. Chanock; Lluís Armengol; Luis A. Pérez-Jurado (BMC Bioinform., 2011)

Identification of polymorphic inversions from genotypes. - Alejandro Cáceres; Suzanne S. Sindi; Benjamin J. Raphael; Mario Cáceres; Juan R. González (BMC Bioinform., 2012)

Independent Multiple Factor Association Analysis for Multiblock Data in Imaging Genetics. - Natalia Vilor-Tejedor; Mohammad Arfan Ikram; Gennady V. Roshchupkin; Alejandro Cáceres; Silvia Alemany; Meike W. Vernooij; Wiro J. Niessen; Cornelia M. van Duijn; Jordi Sunyer; Hieab H. Adams; Juan R. González (Neuroinformatics, 2019)

MADloy: robust detection of mosaic loss of chromosome Y from genotype-array-intensity data. - Juan R. González; Marcos López-Sánchez; Alejandro Cáceres; Pere Puig; Tõnu Esko; Luis A. Pérez-Jurado (BMC Bioinform., 2020)

Fully exploiting SNP arrays: a systematic review on the tools to extract underlying genomic structure. - Laura Balagué-Dobón; Alejandro Cáceres; Juan R. González (Briefings Bioinform., 2022)

teff: estimation of Treatment EFFects on transcriptomic data using causal random forest. - Alejandro Cáceres; Juan R. González (Bioinform., 2022)