Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing. - Rubén Sánchez 002; François Serra; Joaquín Tárraga; Ignacio Medina; José Carbonell; Luis Pulido; Alejandro de María; Salvador Capella-Gutiérrez; Jaime Huerta-Cepas; Toni Gabaldón; Joaquín Dopazo; Hernán Dopazo (Nucleic Acids Res., 2011)

Inferring the regulatory network behind a gene expression experiment. - Marta Bleda; Ignacio Medina; Roberto Alonso; Alejandro de María; Francisco Salavert; Joaquín Dopazo (Nucleic Acids Res., 2012)

CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources. - Marta Bleda; Joaquín Tárraga; Alejandro de María; Francisco Salavert; Luz Garcia-Alonso; Matilde Celma; Ainoha Martín; Joaquín Dopazo; Ignacio Medina (Nucleic Acids Res., 2012)

VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing. - Ignacio Medina; Alejandro de María; Marta Bleda; Francisco Salavert; Roberto Alonso; Cristina Y. González; Joaquín Dopazo (Nucleic Acids Res., 2012)

Genome Maps, a new generation genome browser. - Ignacio Medina; Francisco Salavert; Rubén Sánchez 002; Alejandro de María; Roberto Alonso; Pablo Escobar; Marta Bleda; Joaquín Dopazo (Nucleic Acids Res., 2013)