Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling. - Armando Reyes-Palomares; Raúl Montañez; Alejandro Real-Chicharro; Othmane Chniber; Amine Kerzazi; Ismael Navas-Delgado; Miguel Angel Medina; José Francisco Aldana Montes; Francisca Sánchez-Jiménez (Bioinform., 2009)

Protopia: a protein-protein interaction tool. - Alejandro Real-Chicharro; Iván Ruiz Mostazo; Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; Francisca Sánchez-Jiménez; Miguel Angel Medina; José Francisco Aldana Montes (BMC Bioinform., 2009)

PeroxisomeDB 2.0: an integrative view of the global peroxisomal metabolome. - Agatha Schlüter; Alejandro Real-Chicharro; Toni Gabaldón; Francisca Sánchez-Jiménez; Aurora Pujol (Nucleic Acids Res., 2010)

Social pathway annotation: extensions of the systems biology metabolic modelling assistant. - Ismael Navas-Delgado; Alejandro Real-Chicharro; Miguel Angel Medina; Francisca Sánchez-Jiménez; José Francisco Aldana Montes (Briefings Bioinform., 2011)