EasyDock: customizable and scalable docking tool. - Guzel Minibaeva; Aleksandra Ivanova; Pavel G. Polishchuk (J. Cheminformatics, 2023)

Segmentation by Registration-Enabled SAM Prompt Engineering Using Five Reference Images. - Yaxi Chen; Aleksandra Ivanova; Shaheer U. Saeed; Rikin Hargunani; Jie Huang; Chaozong Liu; Yipeng Hu (WBIR, 2024)

CACHE Challenge #1: Targeting the WDR Domain of LRRK2, A Parkinson's Disease Associated Protein. - Fengling Li; Suzanne Ackloo; Cheryl H. Arrowsmith; Fuqiang Ban; Christopher J. Barden; Hartmut Beck; Jan Beránek; Francois Berenger; Albina Bolotokova; Guillaume Bret; Marko Breznik; Emanuele Carosati; et al. (J. Chem. Inf. Model., 2024)

StreaMD: the toolkit for high-throughput molecular dynamics simulations. - Aleksandra Ivanova; Olena Mokshyna; Pavel G. Polishchuk (J. Cheminformatics, 2024)

Correction: StreaMD: the toolkit for high-throughput molecular dynamics simulations. - Aleksandra Ivanova; Olena Mokshyna; Pavel G. Polishchuk (J. Cheminformatics, 2024)

Patient-specific radiomic feature selection with reconstructed healthy persona of knee MR images. - Yaxi Chen; Simin Ni; Aleksandra Ivanova; Shaheer U. Saeed; Rikin Hargunani; Jie Huang; Chaozong Liu; Yipeng Hu (CoRR, 2025)

Radiomic fingerprints for knee MR images assessment. - Yaxi Chen; Simin Ni; Shaheer U. Saeed; Aleksandra Ivanova; Rikin Hargunani; Jie Huang; Chaozong Liu; Yipeng Hu (CoRR, 2025)