An Ant Colony Optimization Algorithm for the 2D HP Protein Folding Problem. - Alena Shmygelska; Rosalía Aguirre-Hernández; Holger H. Hoos (Ant Algorithms, 2002)

An Improved Ant Colony Optimisation Algorithm for the 2D HP Protein Folding Problem. - Alena Shmygelska; Holger H. Hoos (AI, 2003)

Search for folding nuclei in native protein structures. - Alena Shmygelska (ISMB (Supplement of Bioinformatics), 2005)

An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problem. - Alena Shmygelska; Holger H. Hoos (BMC Bioinform., 2005)

An extremal optimization search method for the protein folding problem: the go-model example. - Alena Shmygelska (GECCO (Companion), 2007)

An adaptive bin framework search method for a beta-sheet protein homopolymer model. - Alena Shmygelska; Holger H. Hoos (BMC Bioinform., 2007)

A replica exchange Monte Carlo algorithm for protein folding in the HP model. - Chris Thachuk; Alena Shmygelska; Holger H. Hoos (BMC Bioinform., 2007)