Molecular dynamics simulation of Matrix Metalloproteinase 2: fluctuations and time evolution of recognition pockets. - Mattia Falconi; Gioia Altobelli; Maria Cristina Iovino; Vincenzo Politi; Alessandro Desideri (J. Comput. Aided Mol. Des., 2003)

Molecular dynamics simulations of the Trp repressor-DNA complex and the AV77 mutant. - Manuela Cavallari; Alessandro Desideri; Mattia Falconi; Mauro Ferrario (Comput. Phys. Commun., 2005)

Structural-dynamical investigation of the ZnuA histidine-rich loop: involvement in zinc management and transport. - Mattia Falconi; Francesco Oteri; Francesco Di Palma; Saurabh Kumar Pandey; Andrea Battistoni; Alessandro Desideri (J. Comput. Aided Mol. Des., 2011)

Specific detection of topoisomerase i from the malaria causing P. falciparum parasite using isothermal Rolling Circle Amplification. - Cinzia Tesauro; Sissel Juul; Barbara Arno; Christine J. F. Nielsen; Paola Fiorani; Rikke F. Frøhlich; Felicie F. Andersen; Alessandro Desideri; Magnus Stougaard; Eskild Petersen; Birgitta Ruth Knudsen (EMBC, 2012)

Analysis of naphthoquinone derivatives as topoisomerase I inhibitors using fragment based QSAR. - Bastikar Virupaksha; Gupte Alpana; Khadke Prashant; Uday Deshpande; Alessandro Desideri (J. Cheminformatics, 2013)

In Vitro Analysis of Pyrogenicity and Cytotoxicity Profiles of Flex Sensors to be Used to Sense Human Joint Postures. - Giovanni Saggio; Luigi Bianchi; Silvia Castelli; Marilina B. Santucci; Maurizio Fraziano; Alessandro Desideri (Sensors, 2014)

Cells Microenvironment Engineering - Multiphoton Absorption for Muscle Regeneration Optimization. - Vito Errico; R. Molinaro; C. Gargioli; F. Ferranti; M. Dinescu; S. Cannata; Giovanni Saggio; S. Rufini; Alessandro Desideri (BIODEVICES, 2016)

A Simple and Fast Semiautomatic Procedure for the Atomistic Modeling of Complex DNA Polyhedra. - Cassio Alves; Federico Iacovelli; Mattia Falconi; Francesca Cardamone; Blasco Morozzo della Rocca; Cristiano L. P. de Oliveira; Alessandro Desideri (J. Chem. Inf. Model., 2016)

A molecular dynamics simulation study decodes the early stage of the disassembly process abolishing the human SAMHD1 function. - Francesca Cardamone; Federico Iacovelli; Giovanni Chillemi; Mattia Falconi; Alessandro Desideri (J. Comput. Aided Mol. Des., 2017)

DNA-Based Biosensor on Flexible Nylon Substrate by Dip-Pen Lithography for Topoisomerase Detection. - Vittorio Ferrara; Alessio Ottaviani; F. Cavaleri; Giuseppe Arrabito; P. Cancemi; Yi-Ping Ho; Birgitta Ruth Knudsen; Marianne Smedegaard Hede; C. Pellerito; Alessandro Desideri; S. Feo; Giovanni Marletta; et al. (Sensors, 2018)

Molecular dynamics characterization of the SAMHD1 Aicardi-Goutières Arg145Gln mutant: structural determinants for the impaired tetramerization. - Francesca Cardamone; Mattia Falconi; Alessandro Desideri (J. Comput. Aided Mol. Des., 2018)

Probing the Functional Topology of a pH-Dependent Triple Helix DNA Nanoswitch Family through Gaussian Accelerated MD Simulation. - Federico Iacovelli; Kevin Cabungcal Hernandez; Alessandro Desideri; Mattia Falconi (J. Chem. Inf. Model., 2019)