Speeding up tandem mass spectral identification using indexes. - Xiaowen Liu; Alessandro Mammana; Vineet Bafna (Bioinform., 2012)

Inferring nucleosome positions with their histone mark annotation from ChIP data. - Alessandro Mammana; Martin Vingron; Ho-Ryun Chung (Bioinform., 2013)

Patterns and algorithms in high-throughput sequencing count data (Muster und Algorithmen für Hochdrucksequenzierungzählwerte) - Alessandro Mammana (2016)