Statistical ensemble of gene regulatory networks of macrophage differentiation. - Filippo Castiglione; Paolo Tieri; Alessandro Palma; Abdul Salam Jarrah (BMC Bioinform., 2016)

Critical nodes reveal peculiar features of human essential genes and protein interactome. - Alessandro Celestini; Marco Cianfriglia; Enrico Mastrostefano; Alessandro Palma; Filippo Castiglione; Paolo Tieri (BIBM, 2019)

Toward a Context-Aware Methodology for Information Security Governance Assessment Validation. - Marco Angelini; Silvia Bonomi; Claudio Ciccotelli; Alessandro Palma (CPS4CIP, 2020)

CancerGeneNet: linking driver genes to cancer hallmarks. - Marta Iannuccelli; Elisa Micarelli; Prisca Lo Surdo; Alessandro Palma; Livia Perfetto; Ilaria Rozzo; Luisa Castagnoli; Luana Licata; Gianni Cesareni (Nucleic Acids Res., 2020)

SIGNOR 2.0, the SIGnaling Network Open Resource 2.0: 2019 update. - Luana Licata; Prisca Lo Surdo; Marta Iannuccelli; Alessandro Palma; Elisa Micarelli; Livia Perfetto; Daniele Peluso; Alberto Calderone; Luisa Castagnoli; Gianni Cesareni (Nucleic Acids Res., 2020)

Context-Aware Trace Alignment with Automated Planning. - Giacomo Acitelli; Marco Angelini; Silvia Bonomi; Fabrizio Maria Maggi; Andrea Marrella; Alessandro Palma (ICPM, 2022)

A Methodology to Support Automatic Cyber Risk Assessment Review. - Marco Angelini; Silvia Bonomi; Alessandro Palma (CoRR, 2022)

A Workflow for Distributed and Resilient Attack Graph Generation. - Alessandro Palma; Silvia Bonomi (DSN-S, 2023)

Attention-based Multi-instance Mixed Models. - Jan P. Engelmann; Alessandro Palma; Jakub M. Tomczak; Fabian J. Theis; Francesco Paolo Casale (CoRR, 2023)

BenchIMP: A Benchmark for Quantitative Evaluation of the Incident Management Process Assessment. - Alessandro Palma; Nicola Bartoloni; Marco Angelini (ARES, 2024)

Mixed Models with Multiple Instance Learning. - Jan P. Engelmann; Alessandro Palma; Jakub M. Tomczak; Fabian J. Theis; Francesco Paolo Casale (AISTATS, 2024)

Improving Attack Graph-Based Self-protecting Systems: A Computational Pipeline for Accuracy-Scalability Trade-off. - Silvia Bonomi; Marco Cuoci; Simone Lenti; Alessandro Palma (CRiSIS, 2024)

It is Time To Steer: A Scalable Framework for Analysis-Driven Attack Graph Generation. - Alessandro Palma; Marco Angelini (ESORICS (4), 2024)

Visually Supporting the Assessment of the Incident Management Process. - Alessandro Palma; Marco Angelini (EuroVA@EuroVis, 2024)

A compliance assessment system for Incident Management process. - Alessandro Palma; Giacomo Acitelli; Andrea Marrella; Silvia Bonomi; Marco Angelini (Comput. Secur., 2024)

Generating Multi-Modal and Multi-Attribute Single-Cell Counts with CFGen. - Alessandro Palma; Till Richter; Hanyi Zhang; Manuel Lubetzki; Alexander Tong 001; Andrea Dittadi; Fabian J. Theis (CoRR, 2024)

Multi-Modal and Multi-Attribute Generation of Single Cells with CFGen. - Alessandro Palma; Till Richter; Hanyi Zhang; Manuel Lubetzki; Alexander Tong 001; Andrea Dittadi; Fabian J. Theis (ICLR, 2025)

SHIELD: Assessing Security-by-Design in Federated Data Spaces Using Attack Graphs. - Alessandro Palma; Nikolaos Papadakis; Georgios Bouloukakis; Joaquín García-Alfaro; Mattia Sospetti; Kostas Magoutis (SAC, 2025)

SPARQ: A QoS-Aware Framework for Mitigating Cyber Risk in Self-Protecting IoT Systems. - Alessandro Palma; Houssam Hajj Hassan; Georgios Bouloukakis (SEAMS@ICSE, 2025)

IMPAVID: Enhancing incident management process compliance assessment with visual analytics. - Alessandro Palma; Marco Angelini (Comput. Graph., 2025)

Behind the scenes of attack graphs: Vulnerable network generator for in-depth experimental evaluation of attack graph scalability. - Alessandro Palma; Silvia Bonomi (Comput. Secur., 2025)

How to assess measurement capabilities of a security monitoring infrastructure and plan investment through a graph-based approach. - Alessandro Palma; Andrea Sorrentino; Silvia Bonomi (Expert Syst. Appl., 2025)

Lowering the boundaries of information security governance: a multi-perspective quantitative viewpoint. - Alessandro Palma (2025)

Beyond the Surface: An NLP-based Methodology to Automatically Estimate CVE Relevance for CAPEC Attack Patterns. - Silvia Bonomi; Andrea Ciavotta; Simone Lenti; Alessandro Palma (CoRR, 2025)

Enforcing Latent Euclidean Geometry in Single-Cell VAEs for Manifold Interpolation. - Alessandro Palma; Sergei Rybakov; Leon Hetzel; Stephan Günnemann; Fabian J. Theis (CoRR, 2025)