A machine learning based approach to improve sidechain optimization. - Sabareesh Subramaniam; Sriraam Natarajan; Alessandro Senes (BCB, 2011)

Structural informatics, modeling, and design with an open-source Molecular Software Library (MSL). - Daniel W. Kulp; Sabareesh Subramaniam; Jason E. Donald; Brett T. Hannigan; Benjamin K. Mueller; Gevorg Grigoryan; Alessandro Senes (J. Comput. Chem., 2012)