The Comparison of Structures and Sequences: Alignment, Searching and the Detection of Common Folds. - Mark S. Johnson; John P. Overington; Yvonne Edwards; Alex C. W. May; Michael A. Rodionov (HICSS (5), 1994)

Amino Acid Substitution Matrices from an Artificial Neural Network Model. - Kuang Lin; Alex C. W. May; William R. Taylor (J. Comput. Biol., 2001)

Threading Using Neural nEtwork (TUNE): the measure of protein sequence-structure compatibility. - Kuang Lin; Alex C. W. May; William R. Taylor (Bioinform., 2002)