Normalizing alternate representations of large sequence variants across multiple bacterial genomes. - Alex Salazar; Ashlee Earl; Christopher Desjardins; Thomas Abeel (BMC Bioinform., 2015)

Approximate, simultaneous comparison of microbial genome architectures via syntenic anchoring of quiver representations. - Alex Salazar; Thomas Abeel (Bioinform., 2018)

An educational guide for nanopore sequencing in the classroom. - Alex Salazar; Franklin L. Nobrega; Christine Anyansi; Cristian Aparicio-Maldonado; Ana Rita Costa; Anna C. Haagsma; Anwar Hiralal; Ahmed Mahfouz; Rebecca E. McKenzie; Teunke van Rossum; Stan J. J. Brouns; Thomas Abeel (PLoS Comput. Biol., 2020)