BLEEP - potential of mean force describing protein-ligand interactions: II. Calculation of binding energies and comparison with experimental data. - John B. O. Mitchell; Roman A. Laskowski; Alexander Alex; Mark J. Forster; Janet M. Thornton (J. Comput. Chem., 1999)

BLEEP - potential of mean force describing protein-ligand interactions: I. Generating potential. - John B. O. Mitchell; Roman A. Laskowski; Alexander Alex; Janet M. Thornton (J. Comput. Chem., 1999)

SATIS: Atom Typing from Chemical Connectivity. - John B. O. Mitchell; Alexander Alex; Michael Snarey (J. Chem. Inf. Comput. Sci., 1999)

Evaluation of a knowledge-based potential of mean force for scoring docked protein-ligand complexes. - Irene Nobeli; John B. O. Mitchell; Alexander Alex; Janet M. Thornton (J. Comput. Chem., 2001)

New Molecular Descriptors Based on Local Properties at the Molecular Surface and a Boiling-Point Model Derived from Them. - Bernd Ehresmann; Marcel J. de Groot; Alexander Alex; Timothy Clark (J. Chem. Inf. Model., 2004)

Enhancing the Effectiveness of Virtual Screening by Fusing Nearest Neighbor Lists: A Comparison of Similarity Coefficients. - Martin Whittle; Valerie J. Gillet; Peter Willett 002; Alexander Alex; Jens Loesel (J. Chem. Inf. Model., 2004)

Visualisation of variable binding pockets on protein surfaces by probabilistic analysis of related structure sets. - Paul Ashford; David S. Moss; Alexander Alex; Siew K. Yeap; Alice Povia; Irene Nobeli; Mark A. Williams (BMC Bioinform., 2012)