JSBML: a flexible Java library for working with SBML. - Andreas Dräger; Nicolas Rodriguez 001; Marine Dumousseau; Alexander Dörr; Clemens Wrzodek; Nicolas Le Novère; Andreas Zell; Michael Hucka (Bioinform., 2011)

Optimization and visualization of the edge weights in optimal assignment methods for virtual screening. - Lars Rosenbaum; Andreas Jahn 001; Alexander Dörr; Andreas Zell (BioData Min., 2013)

The systems biology simulation core algorithm. - Roland Keller; Alexander Dörr; Akito Tabira; Akira Funahashi; Michael J. Ziller; Richard R. Adams; Nicolas Rodriguez 001; Nicolas Le Novère; Noriko Hiroi; Hannes Planatscher; Andreas Zell; Andreas Dräger (BMC Syst. Biol., 2013)

Inferring multi-target QSAR models with taxonomy-based multi-task learning. - Lars Rosenbaum; Alexander Dörr; Matthias R. Bauer; Frank M. Boeckler; Andreas Zell (J. Cheminformatics, 2013)

SBMLSimulator: A Java Tool for Model Simulation and Parameter Estimation in Systems Biology. - Alexander Dörr; Roland Keller; Andreas Zell; Andreas Dräger (Comput., 2014)

A ranking method for the concurrent learning of compounds with various activity profiles. - Alexander Dörr; Lars Rosenbaum; Andreas Zell (J. Cheminformatics, 2015)

pROC-Chemotype Plots Enhance the Interpretability of Benchmarking Results in Structure-Based Virtual Screening. - Tamer M. Ibrahim; Matthias R. Bauer; Alexander Dörr; Erdem Veyisoglu; Frank M. Boeckler (J. Chem. Inf. Model., 2015)

Investigating Recurrent Neural Networks for Feature-Less Computational Drug Design. - Alexander Dörr; Sebastian Otte; Andreas Zell (ICANN (1), 2016)

In Silico Approaches for Polypharmacological Drug Design. - Alexander Dörr (Dr. Hut, 2018)