Chaste: A test-driven approach to software development for biological modelling. - Joe Pitt-Francis; Pras Pathmanathan; Miguel O. Bernabeu; Rafel Bordas; Jonathan Cooper; Alexander G. Fletcher; Gary R. Mirams; Philip J. Murray; James M. Osborne; Alex Walter; S. Jonathan Chapman; Alan Garny; et al. (Comput. Phys. Commun., 2009)

Chaste: An Open Source C++ Library for Computational Physiology and Biology. - Gary R. Mirams; Christopher J. Arthurs; Miguel O. Bernabeu; Rafel Bordas; Jonathan Cooper; Alberto Corrias; Yohan Davit; Sara-Jane Dunn; Alexander G. Fletcher; Daniel G. Harvey; Megan E. Marsh; James M. Osborne; et al. (PLoS Comput. Biol., 2013)

Novel Methods for Analysing Bacterial Tracks Reveal Persistence in Rhodobacter sphaeroides. - Gabriel Rosser; Alexander G. Fletcher; David A. Wilkinson; Jennifer A. de Beyer; Christian A. Yates; Judith P. Armitage; Philip K. Maini; Ruth E. Baker (PLoS Comput. Biol., 2013)

Ten Simple Rules for Effective Computational Research. - James M. Osborne; Miguel O. Bernabeu; Maria Bruna; Ben Calderhead; Jonathan Cooper; Neil Dalchau; Sara-Jane Dunn; Alexander G. Fletcher; Robin Freeman; Derek Groen; Bernhard Knapp; Greg J. McInerny; et al. (PLoS Comput. Biol., 2014)

A parallel implementation of an off-lattice individual-based model of multicellular populations. - Daniel G. Harvey; Alexander G. Fletcher; James M. Osborne; Joe Pitt-Francis (Comput. Phys. Commun., 2015)

Ten Simple Rules for a Successful Cross-Disciplinary Collaboration. - Bernhard Knapp; Rémi Bardenet; Miguel O. Bernabeu; Rafel Bordas; Maria Bruna; Ben Calderhead; Jonathan Cooper; Alexander G. Fletcher; Derek Groen; Bram Kuijper; Joanna Lewis; Greg J. McInerny; et al. (PLoS Comput. Biol., 2015)

Capabilities and Limitations of Tissue Size Control through Passive Mechanical Forces. - Jochen Kursawe; Pavel A. Brodskiy; Jeremiah J. Zartman; Ruth E. Baker; Alexander G. Fletcher (PLoS Comput. Biol., 2015)

Steering Evolution with Sequential Therapy to Prevent the Emergence of Bacterial Antibiotic Resistance. - Daniel Nichol; Peter Jeavons 001; Alexander G. Fletcher; Robert A. Bonomo; Philip K. Maini; Jerome L. Paul; Robert A. Gatenby; Alexander R. A. Anderson; Jacob G. Scott (PLoS Comput. Biol., 2015)

Spatial Metrics of Tumour Vascular Organisation Predict Radiation Efficacy in a Computational Model. - Jacob G. Scott; Alexander G. Fletcher; Alexander R. A. Anderson; Philip K. Maini (PLoS Comput. Biol., 2016)

Impact of implementation choices on quantitative predictions of cell-based computational models. - Jochen Kursawe; Ruth E. Baker; Alexander G. Fletcher (J. Comput. Phys., 2017)

A hierarchical Bayesian model for understanding the spatiotemporal dynamics of the intestinal epithelium. - Oliver J. Maclaren; Aimée Parker; Carmen Pin; Simon R. Carding; Alastair J. M. Watson; Alexander G. Fletcher; Helen M. Byrne; Philip K. Maini (PLoS Comput. Biol., 2017)

Comparing individual-based approaches to modelling the self-organization of multicellular tissues. - James M. Osborne; Alexander G. Fletcher; Joe Pitt-Francis; Philip K. Maini; David J. Gavaghan (PLoS Comput. Biol., 2017)

Numerical Analysis of the Immersed Boundary Method for Cell-Based Simulation. - Fergus R. Cooper; Ruth E. Baker; Alexander G. Fletcher (SIAM J. Sci. Comput., 2017)

Chaste: Cancer, Heart and Soft Tissue Environment. - Fergus R. Cooper; Ruth E. Baker; Miguel O. Bernabeu; Rafel Bordas; Louise Bowler; Alfonso Bueno-Orovio; Helen M. Byrne; Valentina Carapella; Louie Cardone-Noott; Jonathan Cooper; Sara Dutta; Benjamin D. Evans; et al. (J. Open Source Softw., 2020)

Adhesion-regulated junction slippage controls cell intercalation dynamics in an Apposed-Cortex Adhesion Model. - Alexander Nestor-Bergmann; Guy B. Blanchard; Nathan Hervieux; Alexander G. Fletcher; Jocelyn Étienne; Bénédicte Sanson (PLoS Comput. Biol., 2022)

In-silico and in-vitro morphometric analysis of intestinal organoids. - Sandra Montes-Olivas; Danny Legge; Abbie Lund; Alexander G. Fletcher; Ann C. Williams; Lucia Marucci; Martin E. Homer (PLoS Comput. Biol., 2023)

The mechanical influence of densification on epithelial architecture. - Christian Cammarota; Nicole S. Dawney; Philip M. Bellomio; Maren Jüng; Alexander G. Fletcher; Tara M. Finegan; Dan T. Bergstralh (PLoS Comput. Biol., 2024)