Workflows in bioinformatics: meta-analysis and prototype implementation of a workflow generator. - Alexander García Castro; Samuel Thoraval; Leyla J. García; Mark A. Ragan (BMC Bioinform., 2005)

The use of concept maps during knowledge elicitation in ontology development processes - the nutrigenomics use case. - Alexander García Castro; Philippe Rocca-Serra; Robert Stevens 001; Chris F. Taylor; Karim Nashar; Mark A. Ragan; Susanna-Assunta Sansone (BMC Bioinform., 2006)

CMAPS Supporting the Development of OWL Ontologies. - Alexander García Castro; Angela Norena; Andres Betancourt; Leyla J. García (ISWC (Posters & Demos), 2008)

A Semantic Web Service Alignment Tool. - Dionysios D. Kehagias; Alexander García Castro; Dimitrios Tzovaras; Dimitrios Giakoumis (ISWC (Posters & Demos), 2008)

Dasty2, an Ajax protein DAS client. - Rafael C. Jiménez; Antony F. Quinn; Alexander García Castro; Alberto Labarga; Kieran O'Neill; Fernando Martinez; Gustavo A. Salazar; Henning Hermjakob (Bioinform., 2008)

OntoDas - a tool for facilitating the construction of complex queries to the Gene Ontology. - Kieran O'Neill; Alexander García Castro; Anita Schwegmann; Rafael C. Jiménez; Dan Jacobson; Henning Hermjakob (BMC Bioinform., 2008)

Annotating Atomic Components of Papers in Digital Libraries: The Semantic and Social Web Heading towards a Living Document Supporting eSciences. - Alexander García Castro; Leyla Jael García Castro; Alberto Labarga; Olga L. Giraldo; César Montaña; Kieran O'Neill; John A. Bateman (DEXA, 2009)

Tags4Tags: Using Tagging to Consolidate Tags. - Leyla Jael García Castro; Martin Hepp; Alexander García Castro (DEXA, 2009)

TagSorting: A Tagging Environment for Collaboratively Building Ontologies. - Leyla Jael García Castro; Martin Hepp; Alexander García Castro (EKAW, 2010)

Using the Annotation Ontology in Semantic Digital Libraries. - Leyla Jael García Castro; Olga L. Giraldo; Alexander García Castro (ISWC (Posters & Demos), 2010)

Semantic Web and Social Web heading towards Living Documents in the Life Sciences. - Alexander García Castro; Alberto Labarga; Leyla J. García; Olga L. Giraldo; César Montaña; John A. Bateman (J. Web Semant., 2010)

Developing Ontologies within Decentralised Settings. - Alexander García Castro; Kieran O'Neill; Leyla Jael García Castro; Phillip W. Lord; Robert Stevens 001; Óscar Corcho; Frank Gibson (Semantic e-Science, 2010)

Annotating Experimental Records Using Ontologies. - Alexander García Castro; Olga L. Giraldo; Leyla J. García (ICBO, 2011)

Hyperontology for the Biomedical Ontologist: A Sketch and Some Examples. - Oliver Kutz; Till Mossakowski; Janna Hastings; Alexander García Castro; Aleksandra Sojic (ICBO, 2011)

Tagsty: augmented knowledge from community-based annotations on protein sequences. - Leyla Jael García Castro; Alexander García Castro (SWAT4LS, 2011)

A translational model for representing research articles. - Alexander García Castro; Leyla Jael García Castro (SWAT4LS, 2011)

Dasty3, a WEB framework for DAS. - Jose M. Villaveces; Rafael C. Jiménez; Leyla J. García; Gustavo A. Salazar; Bernat Gel; Nicola J. Mulder; Maria Jesus Martin; Alexander García Castro; Henning Hermjakob (Bioinform., 2011)

DAS Writeback: A Collaborative Annotation System. - Gustavo A. Salazar; Rafael C. Jiménez; Alexander García Castro; Henning Hermjakob; Nicola J. Mulder; Edwin H. Blake (BMC Bioinform., 2011)

Using annotations to model discourse: an extension to the Annotation Ontology. - Leyla Jael García Castro; Olga L. Giraldo; Alexander García Castro (SePublica@ESWC, 2012)

Towards the Creation of Semantic Models Based on Computer-Aided Designs. - Nestor Velasco Bermeo; Miguel González-Mendoza 001; Alexander García Castro; Irais Heras Dueñas (MICAI (1), 2012)

Conceptual Exploration of Documents and Digital Libraries in the Biomedical Domain. - Leyla Jael García Castro; Alexander García Castro; John Gómez (SWAT4LS, 2012)

Connections across Scientific Publications based on Semantic Annotations. - Leyla Jael García Castro; Rafael Berlanga Llavori; Dietrich Rebholz-Schuhmann; Alexander García Castro (SePublica, 2013)

Semantic Representation of CAD Models Based on the IGES Standard. - Nestor Velasco Bermeo; Miguel González-Mendoza 001; Alexander García Castro (MICAI (1), 2013)

BioJS: an open source JavaScript framework for biological data visualization. - John Gómez; Leyla J. García; Gustavo A. Salazar; Jose M. Villaveces; Swanand P. Gore; Alexander García Castro; Maria Jesus Martin; Guillaume Launay; Rafael Alcántara; Noemi del-Toro; Marine Dumousseau; Sandra E. Orchard; et al. (Bioinform., 2013)

Biotea: RDFizing PubMed Central in support for the paper as an interface to the Web of Data. - Leyla Jael García Castro; Casey McLaughlin; Alexander García Castro (J. Biomed. Semant., 2013)

SMART Protocols: SeMAntic RepresenTation for Experimental Protocols. - Olga L. Giraldo; Alexander García Castro; Óscar Corcho (LISC@ISWC, 2014)

Social Tags and Linked Data for Ontology Development: A Case Study in the Financial Domain. - Andrés García-Silva; Leyla Jael García Castro; Alexander García Castro; Óscar Corcho (WIMS, 2014)

BioJS: an open source standard for biological visualisation - its status in 2014. - Manuel Corpas; Rafael C. Jiménez; Seth Carbon; Alexander García Castro; Leyla Jael Castro; Tatyana Goldberg; John Gómez; Alex Kalderimis; Suzanna E. Lewis; Ian Mulvany; Aleksandra Pawlik; Francis Rowland; et al. (F1000Research, 2014)

Using Semantics and NLP in the SMART Protocols Repository. - Olga L. Giraldo; Alexander García Castro; Óscar Corcho (ICBO, 2015)

KOBPSY, a knowledge base in psychology and behavioral sciences. - Alexander García Castro; Isabel Barth; Erich Weichselgartner (I-KNOW, 2015)

Using Semantics and NLP in Experimental Protocols. - Olga L. Giraldo; Alexander García Castro; Óscar Corcho; Jose Figueredo (SWAT4LS, 2015)

Digital Scholarship and Open Science in Psychology and the Behavioral Sciences (Dagstuhl Perpectives Workshop 15302). - Alexander García Castro; Janna Hastings; Robert Stevens 001; Erich Weichselgartner (Dagstuhl Reports, 2015)

Building Domain Ontologies Out of Folksonomies and Linked Data. - Andrés García-Silva; Leyla Jael García Castro; Alexander García Castro; Óscar Corcho (Int. J. Artif. Intell. Tools, 2015)

In the pursuit of a semantic similarity metric based on UMLS annotations for articles in PubMed Central Open Access. - Leyla Jael García Castro; Rafael Berlanga Llavori; Alexander García Castro (J. Biomed. Informatics, 2015)

Shō-coin: A Knowledge-Based Economy for Life Sciences. - Alexander García Castro; Erick Antezana; Jael García; Olga L. Giraldo; Pjotr Prins; Rutger A. Vos (SWAT4LS, 2017)

Bioschemas: schema.org for the Life Sciences. - Leyla J. García; Olga L. Giraldo; Alexander García Castro; Michel Dumontier; Bioschemas Community (SWAT4LS, 2017)

Using semantics for representing experimental protocols. - Olga L. Giraldo; Alexander García Castro; Federico López 001; Óscar Corcho (J. Biomed. Semant., 2017)

BioHackathon 2015: Semantics of data for life sciences and reproducible research. - Rutger A. Vos; Toshiaki Katayama; Hiroyuki Mishima; Shin Kawano; Shuichi Kawashima; Jin-Dong Kim; Yuki Moriya; Toshiaki Tokimatsu; Atsuko Yamaguchi; Yasunori Yamamoto; Hongyan Wu; Peter Amstutz; et al. (F1000Research, 2020)

Ten simple rules to run a successful BioHackathon. - Leyla J. García; Erick Antezana; Alexander García Castro; Evan Bolton; Rafael C. Jiménez; Pjotr Prins; Juan M. Banda; Toshiaki Katayama (PLoS Comput. Biol., 2020)

The cybersecurity ontology network: The first building block for a comprehensive cybersecurity knowledge graph (short paper). - Mikel Egaña Aranguren; Jesualdo Tomás Fernández-Breis; Alexander García Castro; Markus Rompe (JOWO, 2024)

Ontology network for the standardization of the EU CBAM report data (short paper). - Astrid Duque-Ramos; Jesualdo Tomás Fernández-Breis; Alexander García Castro; Andreas Rathgeb; Lars Nissen (JOWO, 2024)