PyEvolve: a toolkit for statistical modelling of molecular evolution. - Andrew Butterfield; Vivek Vedagiri; Edward Lang; Cath Lawrence; Matthew J. Wakefield; Alexander Isaev; Gavin A. Huttley (BMC Bioinform., 2004)

ELFies: Executable Region Checkpoints for Performance Analysis and Simulation. - Harish Patil; Alexander Isaev; Wim Heirman; Alen Sabu; Ali Hajiabadi; Trevor E. Carlson (CGO, 2021)

Physically Informed Deep Learning Technique for Estimating Blood Flow Parameters in Four-Vessel Junction after the Fontan Procedure. - Alexander Isaev; Tatiana Dobroserdova; Alexander A. Danilov; Sergey Simakov (Comput., 2024)