Predicting mean ribosome load for 5'UTR of any length using deep learning. - Alexander Karollus; Ziga Avsec; Julien Gagneur (PLoS Comput. Biol., 2021)

The adapted Activity-By-Contact model for enhancer-gene assignment and its application to single-cell data. - Dennis Hecker; Fatemeh Behjati-Ardakani; Alexander Karollus; Julien Gagneur; Marcel H. Schulz (Bioinform., 2023)