Design of Protein Multi-specificity Using an Independent Sequence Search Reduces the Barrier to Low Energy Sequences. - Alexander M. Sevy; Tim M. Jacobs; James E. Crowe Jr.; Jens Meiler (PLoS Comput. Biol., 2015)

Integrating linear optimization with structural modeling to increase HIV neutralization breadth. - Alexander M. Sevy; Swetasudha Panda; James E. Crowe Jr.; Jens Meiler; Yevgeniy Vorobeychik (PLoS Comput. Biol., 2018)

Engineering cross-reactivity in the antibody response to HIV and influenza. - Alexander M. Sevy (2018)

Immune repertoire fingerprinting by principal component analysis reveals shared features in subject groups with common exposures. - Alexander M. Sevy; Cinque S. Soto; Robin G. Bombardi; Jens Meiler; James E. Crowe Jr. (BMC Bioinform., 2019)

Multi-state design of flexible proteins predicts sequences optimal for conformational change. - Marion F. Sauer; Alexander M. Sevy; James E. Crowe Jr.; Jens Meiler (PLoS Comput. Biol., 2020)