Steady-state solutions of a generic model for the formation of capillary networks. - Fordyce A. Davidson; Alexander R. A. Anderson; Mark A. J. Chaplain (Appl. Math. Lett., 2000)

Mathematical modelling of flow in 2D and 3D vascular networks: Applications to anti-angiogenic and chemotherapeutic drug strategies. - Angélique Stéphanou; Steven R. McDougall; Alexander R. A. Anderson; Mark A. J. Chaplain (Math. Comput. Model., 2005)

Mathematical modelling of the influence of blood rheological properties upon adaptative tumour-induced angiogenesis. - Angélique Stéphanou; Steven R. McDougall; Alexander R. A. Anderson; Mark A. J. Chaplain (Math. Comput. Model., 2006)

Computational Methods and Results for Structured Multiscale Models of Tumor Invasion. - Bruce P. Ayati; Glenn F. Webb; Alexander R. A. Anderson (Multiscale Model. Simul., 2006)

The gene-function relationship in the metabolism of yeast and digital organisms. - Philip Gerlee; Torbjörn Lundh; Bing Zhang 003; Alexander R. A. Anderson (ALIFE, 2008)

Mathematical modelling of cancer cell invasion of tissue. - Ignacio Ramis-Conde; Mark A. J. Chaplain; Alexander R. A. Anderson (Math. Comput. Model., 2008)

Modelling evolutionary cell behaviour using neural networks: Application to tumour growth. - Philip Gerlee; Alexander R. A. Anderson (Biosyst., 2009)

Evolving Homeostatic Tissue Using Genetic Algorithms. - Philip Gerlee; David Basanta; Alexander R. A. Anderson (ALIFE, 2010)

Linking Changes in Epithelial Morphogenesis to Cancer Mutations Using Computational Modeling. - Katarzyna A. Rejniak; Shizhen E. Wang; Nicole S. Bryce; Hang Chang; Bahram Parvin; Jerome Jourquin; Lourdes Estrada; Joe W. Gray; Carlos L. Arteaga; Alissa M. Weaver; Vito Quaranta; Alexander R. A. Anderson (PLoS Comput. Biol., 2010)

Intrinsic cell factors that influence tumourigenicity in cancer stem cells - towards hallmarks of cancer stem cells - Jacob G. Scott; Prakash Chinnaiyan; Alexander R. A. Anderson; Anita B. Hjelmeland; David Basanta (CoRR, 2013)

Microenvironmental Variables Must Influence Intrinsic Phenotypic Parameters of Cancer Stem Cells to Affect Tumourigenicity. - Jacob G. Scott; Anita B. Hjelmeland; Prakash Chinnaiyan; Alexander R. A. Anderson; David Basanta (PLoS Comput. Biol., 2014)

Steering Evolution with Sequential Therapy to Prevent the Emergence of Bacterial Antibiotic Resistance. - Daniel Nichol; Peter Jeavons 001; Alexander G. Fletcher; Robert A. Bonomo; Philip K. Maini; Jerome L. Paul; Robert A. Gatenby; Alexander R. A. Anderson; Jacob G. Scott (PLoS Comput. Biol., 2015)

Spatial Metrics of Tumour Vascular Organisation Predict Radiation Efficacy in a Computational Model. - Jacob G. Scott; Alexander G. Fletcher; Alexander R. A. Anderson; Philip K. Maini (PLoS Comput. Biol., 2016)

The Influence of Cellular Characteristics on the Evolution of Shape Homeostasis. - Philip Gerlee; David Basanta; Alexander R. A. Anderson (Artif. Life, 2017)

Stem Cell Plasticity and Niche Dynamics in Cancer Progression. - Noemi Picco; Robert A. Gatenby; Alexander R. A. Anderson (IEEE Trans. Biomed. Eng., 2017)

EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data. - Chandler Gatenbee; Ryan O. Schenck; Rafael R. Bravo; Alexander R. A. Anderson (BMC Bioinform., 2019)

NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline. - Ryan O. Schenck; Eszter Lakatos; Chandler Gatenbee; Trevor A. Graham; Alexander R. A. Anderson (BMC Bioinform., 2019)

Clonal hematopoiesis of indeterminate potential and its impact on patient trajectories after stem cell transplantation. - Derek S. Park; Afua Abrafi Boakye; David E. Muench; H. Leighton Grimes; Pearlie K. Epling-Burnette; Philip K. Maini; Alexander R. A. Anderson; Michael B. Bonsall (PLoS Comput. Biol., 2019)

Hybrid Automata Library: A flexible platform for hybrid modeling with real-time visualization. - Rafael R. Bravo; Etienne Baratchart; Jeffrey West; Ryan O. Schenck; Anna K. Miller; Jill Gallaher; Chandler Gatenbee; David Basanta; Mark Robertson-Tessi; Alexander R. A. Anderson (PLoS Comput. Biol., 2020)

From cells to tissue: How cell scale heterogeneity impacts glioblastoma growth and treatment response. - Jill Gallaher; Susan Christine Massey; Andrea Hawkins-Daarud; Sonal S. Noticewala; Russell C. Rockne; Sandra K. Johnston; Luis Gonzalez-Cuyar; Joseph Juliano; Orlando Gil; Kristin R. Swanson; Peter D. Canoll; Alexander R. A. Anderson (PLoS Comput. Biol., 2020)

IsoMaTrix: a framework to visualize the isoclines of matrix games and quantify uncertainty in structured populations. - Jeffrey West; Yongqian Ma; Artem Kaznatcheev; Alexander R. A. Anderson (Bioinform., 2021)

The role of memory in non-genetic inheritance and its impact on cancer treatment resistance. - Tyler Cassidy; Daniel Nichol; Mark Robertson-Tessi; Morgan Craig; Alexander R. A. Anderson (PLoS Comput. Biol., 2021)

Developing tools for analyzing and viewing multiplexed images. - Sandhya Prabhakaran; Chandler Gatenbee; Alexander R. A. Anderson (Patterns, 2022)

Mistic: An open-source multiplexed image t-SNE viewer. - Sandhya Prabhakaran; Chandler Gatenbee; Mark Robertson-Tessi; Jeffrey West; Amer A. Beg; Jhanelle Gray; Scott Antonia; Robert A. Gatenby; Alexander R. A. Anderson (Patterns, 2022)

The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue. - Philippe Weitz; Masi Valkonen; Leslie Solorzano; Circe Carr; Kimmo Kartasalo; Constance Boissin; Sonja Koivukoski; Aino Kuusela; Dusan Rasic; Yanbo Feng; Sandra Kristiane Sinius Pouplier; Abhinav Sharma; et al. (Medical Image Anal., 2024)