Distributing the comparison of DNA and protein sequences across heterogeneous supercomputers. - Hugh B. Nicholas; Grace Giras; Vasiliki Hartonas-Garmhausen; Michael Kopko; Christopher Maher; Alexander Ropelewski (SC, 1991)

A simple approach for the distribution of computationally intense tasks in an heterogeneous environment: distribution of the MDPP image-processing package. - P. R. Smith; Alexander Ropelewski; Douglas A. Balog; S. Gottesman; David W. Deerfield II (Comput. Appl. Biosci., 1991)

Uses of videoconferencing in the supercomputing environment. - Mary Stephenson; Larry Brandt; Eric D. Sills; Alex Ropelewski; B. Loftis; B. Buzbee (SC, 1993)

Porting Third-Party Applications Packages to the Cray T3D: Programming Issues and Scalability Results. - Frank C. Wimberly; Michael H. Lambert; Nicholas A. Nystrom; Alex Ropelewski; William Young (Parallel Comput., 1996)

Implementation of Genetic Sequence Alignment Programs on Supercomputers. - Alexander Ropelewski; Hugh B. Nicholas; David W. Deerfield II (J. Supercomput., 1997)

The Plasmodium Glutathione S-transferase - Bioinformatics Characterization and Classification into the Sigma Class. - Emilee E. Colón-Lorenzo; Adelfa E. Serrano; Hugh B. Nicholas Jr.; Troy Wymore; Alexander Ropelewski; Ricardo González-Méndez (BIOINFORMATICS, 2010)

A sustainable national gateway for biological computation. - James Taylor 001; Anton Nekrutenko; Nathan Coraor; Philip D. Blood; Alex Ropelewski; Zhihui Zhang; Josephine Palencia; Sergiu Sanielevici; Jared Yanovich; Robert Budden (XSEDE, 2013)

Assisting Bioinformatics Programs at Minority Institutions: Needs Assessment, and Lessons Learned - A Look at an Internship Program. - Ricardo González-Méndez; Jimmy Torres; Pallavi Ishwad; Hugh B. Nicholas Jr.; Alexander Ropelewski (XSEDE, 2016)

A virtual filesystem approach to storage, analysis and delivery of volumetric image data for connectomics. - Arthur W. Wetzel; Greg Hood; Alexander Ropelewski (AIPR, 2017)

Optimizing High Performance Big Data Cancer Workflows. - Ivan Jimenez-Ruiz; Ricardo González-Méndez; Alexander Ropelewski (PEARC, 2017)

De Novo Assembly of Lucina pectinata Genome using Ion Torrent Reads. - Ingrid M. Montes-Rodríguez; Carmen L. Cadilla; Ricardo González-Méndez; Juan Lópéz-Garriga; Alexander Ropelewski (PEARC, 2017)

Applying iRODS to the Brain Image Library. - Sean Deitrich; Jacob Czech; Alexander Ropelewski; Arthur W. Wetzel; Greg Hood; Derek Simmel; Marcel Bruchez; Simon C. Watkins; Alan M. Watson (PEARC, 2018)

The human body at cellular resolution: the NIH Human Biomolecular Atlas Program. - Michael P. Snyder; Shin Lin; Amanda Posgai; Mark Atkinson; Aviv Regev; Jennifer Rood; Orit Rozenblatt-Rosen; Leslie Gaffney; Anna Hupalowska; Rahul Satija; Nils Gehlenborg; Jay Shendure; et al. (Nat., 2019)

Cyberinfrastructure of a Multi-Petabyte Microscopy Resource for Neuroscience Research. - Kathy Benninger; Greg Hood; Derek Simmel; Luke Tuite; Arthur W. Wetzel; Alexander Ropelewski; Simon C. Watkins; Alan M. Watson; Marcel Bruchez (PEARC, 2020)