Development of the force field parameters for phosphoimidazole and phosphohistidine. - Yuri A. Kosinsky; Pavel E. Volynsky; Philippe Lagant; Gérard Vergoten; Ei-Ichiro Suzuki; Alexander S. Arseniev; Roman G. Efremov (J. Comput. Chem., 2004)

Association of transmembrane helices: what determines assembling of a dimer? - Roman G. Efremov; Yana A. Vereshaga; Pavel E. Volynsky; Dmitry E. Nolde; Alexander S. Arseniev (J. Comput. Aided Mol. Des., 2006)

Method To Assess Packing Quality of Transmembrane α-Helices in Proteins, 1. Parametrization Using Structural Data. - Anton O. Chugunov; Valery N. Novoseletsky; Dmitry E. Nolde; Alexander S. Arseniev; Roman G. Efremov (J. Chem. Inf. Model., 2007)

Method To Assess Packing Quality of Transmembrane α-Helices in Proteins, 2. Validation by "Correct vs Misleading" Test. - Anton O. Chugunov; Valery N. Novoseletsky; Dmitry E. Nolde; Alexander S. Arseniev; Roman G. Efremov (J. Chem. Inf. Model., 2007)

Docking of ATP to Ca-ATPase: Considering Protein Domain Motions. - Timothy V. Pyrkov; Yuri A. Kosinsky; Alexander S. Arseniev; John P. Priestle; Edgar Jacoby; Roman G. Efremov (J. Chem. Inf. Model., 2007)